Information for 12-CAATCACAAG (Motif 14)

A G T C C G T A C G T A G C A T A T G C C G T A A T G C C G T A C G T A T A C G
Reverse Opposite:
A T G C A C G T A C G T A T C G C G A T A T C G C G T A A C G T C G A T A C T G
p-value:1e-7
log p-value:-1.820e+01
Information Content per bp:1.848
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif78.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets46.2 +/- 31.7bp
Average Position of motif in Background55.8 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAATCACAAG
CCAATCAA---
 A C G T A G T C C G T A C G T A G C A T A T G C C G T A A T G C C G T A C G T A T A C G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CAATCACAAG
AAACCACANN
 A G T C C G T A C G T A G C A T A T G C C G T A A T G C C G T A C G T A T A C G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAATCACAAG
CAAATCACTG-
 A C G T A G T C C G T A C G T A G C A T A T G C C G T A A T G C C G T A C G T A T A C G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAATCACAAG-
NWAACCACADNN
 A C G T A G T C C G T A C G T A G C A T A T G C C G T A A T G C C G T A C G T A T A C G A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAATCACAAG
NAAACCACAG-
 A C G T A G T C C G T A C G T A G C A T A T G C C G T A A T G C C G T A C G T A T A C G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAATCACAAG-
AAACCACAGAN
 A G T C C G T A C G T A G C A T A T G C C G T A A T G C C G T A C G T A T A C G A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAATCACAAG
AAACCACAGC
 A G T C C G T A C G T A G C A T A T G C C G T A A T G C C G T A C G T A T A C G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAATCACAAG
AAACCGCAAA
 A G T C C G T A C G T A G C A T A T G C C G T A A T G C C G T A C G T A T A C G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

NFYA/MA0060.2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CAATCACAAG---
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A G C A T A T G C C G T A A T G C C G T A C G T A T A C G A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAATCACAAG
CCATCAATCAAA--
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A G C A T A T G C C G T A A T G C C G T A C G T A T A C G
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T