Information for 13-TCATGGWGTTTKC (Motif 20)

A G C T G T A C G T C A A G C T A C T G T A C G G C T A C T A G C G A T A G C T A C G T A C G T G A T C
Reverse Opposite:
C T A G T G C A G T C A T C G A C G T A A G T C C G A T A T G C G T A C T C G A C A G T A C T G C T G A
p-value:1e-8
log p-value:-2.011e+01
Information Content per bp:1.659
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif175.5
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets48.4 +/- 20.1bp
Average Position of motif in Background50.1 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCATGGWGTTTKC
AGTCACGC-------
 A C G T A C G T A G C T G T A C G T C A A G C T A C T G T A C G G C T A C T A G C G A T A G C T A C G T A C G T G A T C
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCATGGWGTTTKC
GTCATN--------
 A C G T A G C T G T A C G T C A A G C T A C T G T A C G G C T A C T A G C G A T A G C T A C G T A C G T G A T C
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCATGGWGTTTKC
GTCACGCTCNCTGA
 A C G T A G C T G T A C G T C A A G C T A C T G T A C G G C T A C T A G C G A T A G C T A C G T A C G T G A T C
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCATGGWGTTTKC--
CCTTGCAATTTTTNN
 A G C T G T A C G T C A A G C T A C T G T A C G G C T A C T A G C G A T A G C T A C G T A C G T G A T C A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

RXRA::VDR/MA0074.1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCATGGWGTTTKC
GGGTCAACGAGTTCA-
 A C G T A C G T A C G T A G C T G T A C G T C A A G C T A C T G T A C G G C T A C T A G C G A T A G C T A C G T A C G T G A T C
C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TCATGGWGTTTKC
CCTTAATNGNTTTT--
 A C G T A C G T A C G T A G C T G T A C G T C A A G C T A C T G T A C G G C T A C T A G C G A T A G C T A C G T A C G T G A T C
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TCATGGWGTTTKC
NANTTCATTGAATTA--
 A C G T A C G T A C G T A C G T A G C T G T A C G T C A A G C T A C T G T A C G G C T A C T A G C G A T A G C T A C G T A C G T G A T C
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCATGGWGTTTKC
NTTATTGATTTTTT
 A C G T A G C T G T A C G T C A A G C T A C T G T A C G G C T A C T A G C G A T A G C T A C G T A C G T G A T C
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

FOXD2/MA0847.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TCATGGWGTTTKC
------TGTTTAC
 A G C T G T A C G T C A A G C T A C T G T A C G G C T A C T A G C G A T A G C T A C G T A C G T G A T C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C

Vdr/MA0693.1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TCATGGWGTTTKC
GAGTTCATTGAGTTCA-
 A C G T A C G T A C G T A C G T A G C T G T A C G T C A A G C T A C T G T A C G G C T A C T A G C G A T A G C T A C G T A C G T G A T C
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A A C G T