Information for 5-TGCCCTGCAGGGGCAG (Motif 12)

C G A T A C T G A T G C A G T C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C T G A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G G T A C A G T C A G T C A G T C A C G T A C T G A T G C C G T A A C T G A C T G A T C G A G T C C G T A
p-value:1e-11
log p-value:-2.707e+01
Information Content per bp:1.938
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.3 +/- 24.4bp
Average Position of motif in Background24.2 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGCCCTGCAGGGGCAG
--CACAGCAGGGGG--
 C G A T A C T G A T G C A G T C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C T G A C T G A G T C C G T A A C T G
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGCCCTGCAGGGGCAG
-DCHCAGCAGGRGGCC
 C G A T A C T G A T G C A G T C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C T G A C T G A G T C C G T A A C T G
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGCCCTGCAGGGGCAG
----SDGCAGGTGCNS
 C G A T A C T G A T G C A G T C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C T G A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGCCCTGCAGGGGCAG-
---ANTGCGGGGGCGGN
 C G A T A C T G A T G C A G T C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C T G A C T G A G T C C G T A A C T G A C G T
A C G T A C G T A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGCCCTGCAGGGGCAG------
--GCCASCAGGGGGCGCYVNNG
 C G A T A C T G A T G C A G T C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C T G A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGCCCTGCAGGGGCAG
TGCCCTGAGGGCA---
 C G A T A C T G A T G C A G T C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C T G A C T G A G T C C G T A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGCCCTGCAGGGGCAG
TGCCCTGAGGGCA---
 C G A T A C T G A T G C A G T C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C T G A C T G A G T C C G T A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGCCCTGCAGGGGCAG---
TGGCCACCAGGGGGCGCTA
 C G A T A C T G A T G C A G T C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C T G A C T G A G T C C G T A A C T G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTGCAGGGGCAG
CCACACAGCAGGAGA--
 A C G T C G A T A C T G A T G C A G T C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C T G A C T G A G T C C G T A A C T G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGCCCTGCAGGGGCAG----
----NNTNAGGGGCGGNNNN
 C G A T A C T G A T G C A G T C A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C T G A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T