Information for 4-ACARCWCCWWGGACAG (Motif 4)

C G T A A G T C C G T A C T A G G T A C C G T A A G T C G T A C G C T A G C A T A C T G A C T G G T C A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T A G T C A G T C C G T A C G A T A C T G A C T G C G A T A C T G A G T C A C G T A C T G G C A T
p-value:1e-16
log p-value:-3.837e+01
Information Content per bp:1.872
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif17.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.6 +/- 13.7bp
Average Position of motif in Background64.7 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-ACARCWCCWWGGACAG----
TTCAGCACCATGGACAGCGCC
 A C G T C G T A A G T C C G T A C T A G G T A C C G T A A G T C G T A C G C T A G C A T A C T G A C T G G T C A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:ACARCWCCWWGGACAG----
TCAGCACCATGGACAGCTCC
 C G T A A G T C C G T A C T A G G T A C C G T A A G T C G T A C G C T A G C A T A C T G A C T G G T C A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.62
Offset:6
Orientation:forward strand
Alignment:ACARCWCCWWGGACAG
------CCAGGAACAG
 C G T A A G T C C G T A C T A G G T A C C G T A A G T C G T A C G C T A G C A T A C T G A C T G G T C A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:ACARCWCCWWGGACAG
------CAAAGGTCAG
 C G T A A G T C C G T A C T A G G T A C C G T A A G T C G T A C G C T A G C A T A C T G A C T G G T C A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.56
Offset:7
Orientation:forward strand
Alignment:ACARCWCCWWGGACAG-
-------CAAGGHCANV
 C G T A A G T C C G T A C T A G G T A C C G T A A G T C G T A C G C T A G C A T A C T G A C T G G T C A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ACARCWCCWWGGACAG
-----NTCAAGGTCA-
 C G T A A G T C C G T A C T A G G T A C C G T A A G T C G T A C G C T A G C A T A C T G A C T G G T C A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACARCWCCWWGGACAG-
--AAGTTCAAGGTCAGC
 C G T A A G T C C G T A C T A G G T A C C G T A A G T C G T A C G C T A G C A T A C T G A C T G G T C A A G T C C G T A A C T G A C G T
A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ACARCWCCWWGGACAG
-----BTCAAGGTCA-
 C G T A A G T C C G T A C T A G G T A C C G T A A G T C G T A C G C T A G C A T A C T G A C T G G T C A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.53
Offset:9
Orientation:forward strand
Alignment:ACARCWCCWWGGACAG-
---------TTGACAGC
 C G T A A G T C C G T A C T A G G T A C C G T A A G T C G T A C G C T A G C A T A C T G A C T G G T C A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.52
Offset:11
Orientation:reverse strand
Alignment:ACARCWCCWWGGACAG-
-----------CACAGN
 C G T A A G T C C G T A C T A G G T A C C G T A A G T C G T A C G C T A G C A T A C T G A C T G G T C A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C