Information for 6-CATGACATGACAC (Motif 4)

A G T C G T C A C G A T T C A G C G T A G T A C C T G A A C G T A C T G C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A G T C G T C A A G C T A C T G A C G T A G T C C G T A A C G T A C T G
p-value:1e-12
log p-value:-2.914e+01
Information Content per bp:1.882
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.1 +/- 19.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CATGACATGACAC------
--ATAAATGACACCTATCA
 A G T C G T C A C G A T T C A G C G T A G T A C C T G A A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CATGACATGACAC
----ARNTGACA-
 A G T C G T C A C G A T T C A G C G T A G T A C C T G A A C G T A C T G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CATGACATGACAC
----NCGTGACN-
 A G T C G T C A C G A T T C A G C G T A G T A C C T G A A C G T A C T G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.67
Offset:6
Orientation:forward strand
Alignment:CATGACATGACAC
------TTGACAG
 A G T C G T C A C G A T T C A G C G T A G T A C C T G A A C G T A C T G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CATGACATGACAC
-----CATGAC--
 A G T C G T C A C G A T T C A G C G T A G T A C C T G A A C G T A C T G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.64
Offset:6
Orientation:forward strand
Alignment:CATGACATGACAC-
------TTGACAGG
 A G T C G T C A C G A T T C A G C G T A G T A C C T G A A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

CREB3/MA0638.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CATGACATGACAC
NGATGACGTGGCAN
 A C G T A G T C G T C A C G A T T C A G C G T A G T A C C T G A A C G T A C T G C G T A A G T C C G T A A G T C
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C

TFEB/MA0692.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CATGACATGACAC
-ATCACGTGAC--
 A G T C G T C A C G A T T C A G C G T A G T A C C T G A A C G T A C T G C G T A A G T C C G T A A G T C
A C G T T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CATGACATGACAC
-ATCACGTGAC--
 A G T C G T C A C G A T T C A G C G T A G T A C C T G A A C G T A C T G C G T A A G T C C G T A A G T C
A C G T T C G A G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G T C A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CATGACATGACAC
-GTCACGTGACYV
 A G T C G T C A C G A T T C A G C G T A G T A C C T G A A C G T A C T G C G T A A G T C C G T A A G T C
A C G T T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C