Information for 15-TGTCTGCTCG (Motif 21)

A C G T A C T G A C G T A G T C C G A T A C T G A T G C A C G T A G T C A C T G
Reverse Opposite:
T G A C T C A G G T C A A T C G A G T C C G T A A C T G T G C A T G A C C G T A
p-value:1e-6
log p-value:-1.491e+01
Information Content per bp:1.815
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.84%
Number of Background Sequences with motif257.0
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets41.9 +/- 24.1bp
Average Position of motif in Background50.6 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGTCTGCTCG
CTGTCTGG---
 A C G T A C G T A C T G A C G T A G T C C G A T A C T G A T G C A C G T A G T C A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TGTCTGCTCG
VBSYGTCTGG---
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G A T A C T G A T G C A C G T A G T C A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TGTCTGCTCG
TWGTCTGV---
 A C G T A C G T A C T G A C G T A G T C C G A T A C T G A T G C A C G T A G T C A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCTGCTCG--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G A T A C T G A T G C A C G T A G T C A C T G A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGTCTGCTCG--
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G A T A C T G A T G C A C G T A G T C A C T G A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTCTGCTCG-
CAGTGTGGTCGC
 A C G T A C G T A C T G A C G T A G T C C G A T A C T G A T G C A C G T A G T C A C T G A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGTCTGCTCG
TGTCANYT--
 A C G T A C T G A C G T A G T C C G A T A C T G A T G C A C G T A G T C A C T G
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGTCTGCTCG
CGTGGGTGGTCC
 A C G T A C G T A C G T A C T G A C G T A G T C C G A T A C T G A T G C A C G T A G T C A C T G
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGTCTGCTCG--
NTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G A T A C T G A T G C A C G T A G T C A C T G A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGTCTGCTCG-----
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C T G A C G T A G T C C G A T A C T G A T G C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G