Information for 3-SGGCGCWCTW (Motif 6)

A T G C C T A G A C T G G T A C T A C G A G T C C G T A A G T C C G A T C G T A
Reverse Opposite:
C G A T C G T A C T A G G C A T A C T G A T G C A C T G A G T C A G T C A T C G
p-value:1e-12
log p-value:-2.905e+01
Information Content per bp:1.713
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif60.8
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets49.7 +/- 21.2bp
Average Position of motif in Background57.1 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:SGGCGCWCTW
-GGCGCGCT-
 A T G C C T A G A C T G G T A C T A C G A G T C C G T A A G T C C G A T C G T A
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:SGGCGCWCTW
CGGAGC----
 A T G C C T A G A C T G G T A C T A C G A G T C C G T A A G T C C G A T C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----SGGCGCWCTW-
ATAAGGGCGCGCGAT
 A C G T A C G T A C G T A C G T A T G C C T A G A C T G G T A C T A C G A G T C C G T A A G T C C G A T C G T A A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----SGGCGCWCTW-
ATAAAGGCGCGCGAT
 A C G T A C G T A C G T A C G T A T G C C T A G A C T G G T A C T A C G A G T C C G T A A G T C C G A T C G T A A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----SGGCGCWCTW--
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A C G T A T G C C T A G A C T G G T A C T A C G A G T C C G T A A G T C C G A T C G T A A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---SGGCGCWCTW----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A T G C C T A G A C T G G T A C T A C G A G T C C G T A A G T C C G A T C G T A A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--SGGCGCWCTW
TTTGGCGCCAAA
 A C G T A C G T A T G C C T A G A C T G G T A C T A C G A G T C C G T A A G T C C G A T C G T A
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--SGGCGCWCTW
TGGGGCCCAC--
 A C G T A C G T A T G C C T A G A C T G G T A C T A C G A G T C C G T A A G T C C G A T C G T A
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--SGGCGCWCTW----
CGAAGCACACAAAATA
 A C G T A C G T A T G C C T A G A C T G G T A C T A C G A G T C C G T A A G T C C G A T C G T A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

E2F3/MA0469.2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----SGGCGCWCTW---
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T A T G C C T A G A C T G G T A C T A C G A G T C C G T A A G T C C G A T C G T A A C G T A C G T A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T