Information for 7-GCAGGGCTAGTGGCAG (Motif 20)

A T C G A G T C G T C A A C T G A T C G A T C G A G T C A C G T G T C A A C T G A C G T C T A G A C T G G T A C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A G T C C G T A A G T C A C G T C G T A A C T G A T G C A T G C A G T C A C G T A C T G A T G C
p-value:1e-8
log p-value:-1.960e+01
Information Content per bp:1.907
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.4 +/- 15.1bp
Average Position of motif in Background38.3 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCAGGGCTAGTGGCAG
--AGGCCTAG------
 A T C G A G T C G T C A A C T G A T C G A T C G A G T C A C G T G T C A A C T G A C G T C T A G A C T G G T A C C G T A A C T G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCAGGGCTAGTGGCAG----
YCAGGCWCAGTACCAGGCTC
 A T C G A G T C G T C A A C T G A T C G A T C G A G T C A C G T G T C A A C T G A C G T C T A G A C T G G T A C C G T A A C T G A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCAGGGCTAGTGGCAG
--AGGCCTNG------
 A T C G A G T C G T C A A C T G A T C G A T C G A G T C A C G T G T C A A C T G A C G T C T A G A C T G G T A C C G T A A C T G
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GCAGGGCTAGTGGCAG
--AAGGCAAGTGT---
 A T C G A G T C G T C A A C T G A T C G A T C G A G T C A C G T G T C A A C T G A C G T C T A G A C T G G T A C C G T A A C T G
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GCAGGGCTAGTGGCAG--
---RGSMTBCTGGGAAAT
 A T C G A G T C G T C A A C T G A T C G A T C G A G T C A C G T G T C A A C T G A C G T C T A G A C T G G T A C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:GCAGGGCTAGTGGCAG
-------TNNGGGCAG
 A T C G A G T C G T C A A C T G A T C G A T C G A G T C A C G T G T C A A C T G A C G T C T A G A C T G G T A C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:GCAGGGCTAGTGGCAG--
--------VBTGWCAGCB
 A T C G A G T C G T C A A C T G A T C G A T C G A G T C A C G T G T C A A C T G A C G T C T A G A C T G G T A C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.47
Offset:7
Orientation:forward strand
Alignment:GCAGGGCTAGTGGCAG---
-------AGGTGHCAGACA
 A T C G A G T C G T C A A C T G A T C G A T C G A G T C A C G T G T C A A C T G A C G T C T A G A C T G G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.46
Offset:2
Orientation:reverse strand
Alignment:GCAGGGCTAGTGGCAG--
--NNTGTAGGTAGCANNT
 A T C G A G T C G T C A A C T G A T C G A T C G A G T C A C G T G T C A A C T G A C G T C T A G A C T G G T A C C G T A A C T G A C G T A C G T
A C G T A C G T A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.46
Offset:6
Orientation:forward strand
Alignment:GCAGGGCTAGTGGCAG
------CTAATKGV--
 A T C G A G T C G T C A A C T G A T C G A T C G A G T C A C G T G T C A A C T G A C G T C T A G A C T G G T A C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T