Information for 13-MRCCTCTTGGCCA (Motif 17)

G T C A C T G A A G T C A G T C A G C T A G T C C G A T A C G T A C T G A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C T G C T G A A C T G A C T G A G C T A C G T
p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.3 +/- 15.8bp
Average Position of motif in Background65.1 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:forward strand
Alignment:MRCCTCTTGGCCA
------TTGGCA-
 G T C A C T G A A G T C A G T C A G C T A G T C C G A T A C G T A C T G A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:MRCCTCTTGGCCA
--CCGATTGGCT-
 G T C A C T G A A G T C A G T C A G C T A G T C C G A T A C G T A C T G A C T G A G T C A G T C C G T A
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:MRCCTCTTGGCCA-
-----NTTGGCANN
 G T C A C T G A A G T C A G T C A G C T A G T C C G A T A C G T A C T G A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-MRCCTCTTGGCCA-
TGACCTTTTGACCTC
 A C G T G T C A C T G A A G T C A G T C A G C T A G T C C G A T A C G T A C T G A C T G A G T C A G T C C G T A A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:MRCCTCTTGGCCA-
----NNTTGGCANN
 G T C A C T G A A G T C A G T C A G C T A G T C C G A T A C G T A C T G A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:MRCCTCTTGGCCA-----
--NNNNTTGGGCACNNCN
 G T C A C T G A A G T C A G T C A G C T A G T C C G A T A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------MRCCTCTTGGCCA
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A A G T C A G T C A G C T A G T C C G A T A C G T A C T G A C T G A G T C A G T C C G T A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:MRCCTCTTGGCCA
-----CTAGGCCT
 G T C A C T G A A G T C A G T C A G C T A G T C C G A T A C G T A C T G A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:MRCCTCTTGGCCA
-----CTTGGCAA
 G T C A C T G A A G T C A G T C A G C T A G T C C G A T A C G T A C T G A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-MRCCTCTTGGCCA
TCACCTCTGGGCAG
 A C G T G T C A C T G A A G T C A G T C A G C T A G T C C G A T A C G T A C T G A C T G A G T C A G T C C G T A
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G