Information for 3-AKKAAATCYCAKC (Motif 9)

C G T A A C G T A C T G C G T A C G T A C G T A A C G T A G T C A G C T A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G G T A C A C G T A C T G C T G A A C T G C G T A A C G T C G A T A C G T G T A C G T C A C G A T
p-value:1e-10
log p-value:-2.350e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 31.4bp
Average Position of motif in Background53.9 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.79
Offset:3
Orientation:forward strand
Alignment:AKKAAATCYCAKC-
---AAATCACAGCA
 C G T A A C G T A C T G C G T A C G T A C G T A A C G T A G T C A G C T A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:AKKAAATCYCAKC
---AAATCACTGC
 C G T A A C G T A C T G C G T A C G T A C G T A A C G T A G T C A G C T A G T C C G T A A C T G A G T C
A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AKKAAATCYCAKC
--CAAATCACTG-
 C G T A A C G T A C T G C G T A C G T A C G T A A C G T A G T C A G C T A G T C C G T A A C T G A G T C
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AKKAAATCYCAKC---
NNNTCCATCCCATAANN
 A C G T C G T A A C G T A C T G C G T A C G T A C G T A A C G T A G T C A G C T A G T C C G T A A C T G A G T C A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AKKAAATCYCAKC
NACAGGAAAT------
 A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A A C G T A G T C A G C T A G T C C G T A A C T G A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AKKAAATCYCAKC-
NANANTTAATCCCNNNN
 A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A A C G T A G T C A G C T A G T C C G T A A C T G A G T C A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AKKAAATCYCAKC
-GGAAANCCCC--
 C G T A A C G T A C T G C G T A C G T A C G T A A C G T A G T C A G C T A G T C C G T A A C T G A G T C
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AKKAAATCYCAKC
-GGAAATTCCC--
 C G T A A C G T A C T G C G T A C G T A C G T A A C G T A G T C A G C T A G T C C G T A A C T G A G T C
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AKKAAATCYCAKC-
GATAATTAATCCCTCTT
 A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A A C G T A G T C A G C T A G T C C G T A A C T G A G T C A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AKKAAATCYCAKC
ATTAAA-------
 C G T A A C G T A C T G C G T A C G T A C G T A A C G T A G T C A G C T A G T C C G T A A C T G A G T C
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T