Information for 4-TGKGSKTGMCYYACAC (Motif 6)

A C G T A T C G C A G T C T A G T A C G C A T G A C G T T A C G G T C A G T A C G A T C A G T C C G T A A G T C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G C G A T T C A G C T A G C A T G A C G T A T G C G T C A G T A C A T G C A G T C G T C A A T G C C G T A
p-value:1e-10
log p-value:-2.517e+01
Information Content per bp:1.695
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.6 +/- 27.5bp
Average Position of motif in Background49.7 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGKGSKTGMCYYACAC-
-----NTGATTGACAGN
 A C G T A T C G C A G T C T A G T A C G C A T G A C G T T A C G G T C A G T A C G A T C A G T C C G T A A G T C C G T A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TGKGSKTGMCYYACAC--
------TGAGTGACAGSC
 A C G T A T C G C A G T C T A G T A C G C A T G A C G T T A C G G T C A G T A C G A T C A G T C C G T A A G T C C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGKGSKTGMCYYACAC-
-----BTGABTGACAGS
 A C G T A T C G C A G T C T A G T A C G C A T G A C G T T A C G G T C A G T A C G A T C A G T C C G T A A G T C C G T A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:TGKGSKTGMCYYACAC--
----------TCACACCT
 A C G T A T C G C A G T C T A G T A C G C A T G A C G T T A C G G T C A G T A C G A T C A G T C C G T A A G T C C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX5/MA0807.1/Jaspar

Match Rank:5
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:TGKGSKTGMCYYACAC--
----------TCACACCT
 A C G T A T C G C A G T C T A G T A C G C A T G A C G T T A C G G T C A G T A C G A T C A G T C C G T A A G T C C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.51
Offset:11
Orientation:reverse strand
Alignment:TGKGSKTGMCYYACAC-
-----------CACAGN
 A C G T A T C G C A G T C T A G T A C G C A T G A C G T T A C G G T C A G T A C G A T C A G T C C G T A A G T C C G T A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.50
Offset:10
Orientation:reverse strand
Alignment:TGKGSKTGMCYYACAC--
----------TCACACCT
 A C G T A T C G C A G T C T A G T A C G C A T G A C G T T A C G G T C A G T A C G A T C A G T C C G T A A G T C C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGKGSKTGMCYYACAC
NNTGTGGTTT--------
 A C G T A C G T A C G T A T C G C A G T C T A G T A C G C A T G A C G T T A C G G T C A G T A C G A T C A G T C C G T A A G T C C G T A A T G C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.50
Offset:10
Orientation:reverse strand
Alignment:TGKGSKTGMCYYACAC--
----------TCACACCT
 A C G T A T C G C A G T C T A G T A C G C A T G A C G T T A C G G T C A G T A C G A T C A G T C C G T A A G T C C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TGKGSKTGMCYYACAC
---AGGTGNCAGACAG
 A C G T A T C G C A G T C T A G T A C G C A T G A C G T T A C G G T C A G T A C G A T C A G T C C G T A A G T C C G T A A T G C
A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G