p-value: | 1e-9 |
log p-value: | -2.214e+01 |
Information Content per bp: | 1.626 |
Number of Target Sequences with motif | 33.0 |
Percentage of Target Sequences with motif | 4.44% |
Number of Background Sequences with motif | 585.4 |
Percentage of Background Sequences with motif | 1.19% |
Average Position of motif in Targets | 52.0 +/- 26.7bp |
Average Position of motif in Background | 51.4 +/- 26.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.9 |
Multiplicity (# of sites on avg that occur together) | 1.03 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox2/MA0143.3/Jaspar
Match Rank: | 1 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GATCTKCCTTTGT- ------CCTTTGTT |
|
|
|
Rarb(var.2)/MA0858.1/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GATCTKCCTTTGT--- TGACCTTTANTTGACCT |
|
|
|
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GATCTKCCTTTGT -AGGVNCCTTTGT |
|
|
|
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GATCTKCCTTTGT- ------CCWTTGTY |
|
|
|
POL008.1_DCE_S_I/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GATCTKCCTTTGT --GCTTCC----- |
|
|
|
SOX10/MA0442.1/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GATCTKCCTTTGT -------CTTTGT |
|
|
|
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GATCTKCCTTTGT--- ------CCWTTGTYYB |
|
|
|
RARA::RXRA/MA0159.1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GATCTKCCTTTGT--- TGACCTCTCNNTGACCT |
|
|
|
RARA(var.2)/MA0730.1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GATCTKCCTTTGT--- TGACCTTTGCATGACCT |
|
|
|
Sox3/MA0514.1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GATCTKCCTTTGT--- ------CCTTTGTTTT |
|
|
|