Information for 4-GGGCGCVGTT (Motif 2)

A C T G C T A G A C T G A G T C A C T G A G T C T C G A A T C G A C G T A C G T
Reverse Opposite:
C G T A C G T A A T G C A G C T A C T G A G T C A C T G G T A C A G T C A G T C
p-value:1e-13
log p-value:-3.070e+01
Information Content per bp:1.885
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif25.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets62.3 +/- 21.1bp
Average Position of motif in Background44.0 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GGGCGCVGTT
-GGCGCGCT-
 A C T G C T A G A C T G A G T C A C T G A G T C T C G A A T C G A C G T A C G T
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGCVGTT--
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T A C G T A C T G C T A G A C T G A G T C A C T G A G T C T C G A A T C G A C G T A C G T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGGCGCVGTT--
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C T G C T A G A C T G A G T C A C T G A G T C T C G A A T C G A C G T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGGCGCVGTT--
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A C T G C T A G A C T G A G T C A C T G A G T C T C G A A T C G A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGCVGTT-
NNVDGGGYGGGGCYN
 A C G T A C G T A C G T A C G T A C T G C T A G A C T G A G T C A C T G A G T C T C G A A T C G A C G T A C G T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGGCGCVGTT-
---GGCVGTTR
 A C T G C T A G A C T G A G T C A C T G A G T C T C G A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGGCGCVGTT--
--BRRCVGTTDN
 A C T G C T A G A C T G A G T C A C T G A G T C T C G A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

SP4/MA0685.1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCGCVGTT--
NAAGGGGGCGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G A G T C A C T G A G T C T C G A A T C G A C G T A C G T A C G T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

E2F3/MA0469.2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCGCVGTT---
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G A G T C A C T G A G T C T C G A A T C G A C G T A C G T A C G T A C G T A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCGCVGTT
NANAAGGGCGTGGTC
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G A G T C A C T G A G T C T C G A A T C G A C G T A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C