Information for 6-GWYWTTKGSCTTTTGT (Motif 7)

A C T G C G A T A G T C C G T A C G A T A G C T A C T G C T A G A T G C A G T C A C G T A C G T A C G T A G C T A T C G C G A T
Reverse Opposite:
C G T A A T G C C T G A C G T A T C G A C G T A A C T G A T C G A G T C G T A C C T G A C G T A C G A T C T A G C G T A A G T C
p-value:1e-13
log p-value:-3.048e+01
Information Content per bp:1.778
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 25.7bp
Average Position of motif in Background83.0 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GWYWTTKGSCTTTTGT-
-NNATTGGACTTTNGNN
 A C T G C G A T A G T C C G T A C G A T A G C T A C T G C T A G A T G C A G T C A C G T A C G T A C G T A G C T A T C G C G A T A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Rarg/MA0859.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GWYWTTKGSCTTTTGT----
----TTGACCTTTTGACCTT
 A C T G C G A T A G T C C G T A C G A T A G C T A C T G C T A G A T G C A G T C A C G T A C G T A C G T A G C T A T C G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

RARA/MA0729.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GWYWTTKGSCTTTTGT----
--CATTGACCTTTTGACCTC
 A C T G C G A T A G T C C G T A C G A T A G C T A C T G C T A G A T G C A G T C A C G T A C G T A C G T A G C T A T C G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GWYWTTKGSCTTTTGT
TGGACTTTGNNCTNTG--
 A C G T A C G T A C T G C G A T A G T C C G T A C G A T A G C T A C T G C T A G A T G C A G T C A C G T A C G T A C G T A G C T A T C G C G A T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GWYWTTKGSCTTTTGT-
-----TGACCTTTNCNT
 A C T G C G A T A G T C C G T A C G A T A G C T A C T G C T A G A T G C A G T C A C G T A C G T A C G T A G C T A T C G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

Rarb/MA0857.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GWYWTTKGSCTTTTGT-----
-----TGACCTTTTGACCTTT
 A C T G C G A T A G T C C G T A C G A T A G C T A C T G C T A G A T G C A G T C A C G T A C G T A C G T A G C T A T C G C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GWYWTTKGSCTTTTGT----
-----TGACCTTTTGACCTC
 A C T G C G A T A G T C C G T A C G A T A G C T A C T G C T A G A T G C A G T C A C G T A C G T A C G T A G C T A T C G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GWYWTTKGSCTTTTGT
TGACCTTGACCT-----
 A C G T A C T G C G A T A G T C C G T A C G A T A G C T A C T G C T A G A T G C A G T C A C G T A C G T A C G T A G C T A T C G C G A T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GWYWTTKGSCTTTTGT
-----TTGACTTTT--
 A C T G C G A T A G T C C G T A C G A T A G C T A C T G C T A G A T G C A G T C A C G T A C G T A C G T A G C T A T C G C G A T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GWYWTTKGSCTTTTGT-
-NNNNTGACCTTTNNNN
 A C T G C G A T A G T C C G T A C G A T A G C T A C T G C T A G A T G C A G T C A C G T A C G T A C G T A G C T A T C G C G A T A C G T
A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A