Information for 14-TGABCTGTTGCATVTG (Motif 25)

A C G T A T C G C T G A A G C T A G T C A C G T C T A G A G C T G A C T A C T G A G T C G T C A C A G T T A C G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C G T C A A C G T A C T G G T A C C T G A C T G A A G T C C G T A A C T G T C G A A G C T A T G C C G T A
p-value:1e-7
log p-value:-1.734e+01
Information Content per bp:1.790
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 18.4bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGABCTGTTGCATVTG
CCACCTGTTGCAT---
 A C G T A T C G C T G A A G C T A G T C A C G T C T A G A G C T G A C T A C T G A G T C G T C A C A G T T A C G A C G T A C T G
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGABCTGTTGCATVTG
ANCCACCTGTTGCNC---
 A C G T A C G T A C G T A T C G C T G A A G C T A G T C A C G T C T A G A G C T G A C T A C T G A G T C G T C A C A G T T A C G A C G T A C T G
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGABCTGTTGCATVTG
GTGACCTT---------
 A C G T A C G T A T C G C T G A A G C T A G T C A C G T C T A G A G C T G A C T A C T G A G T C G T C A C A G T T A C G A C G T A C T G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGABCTGTTGCATVTG
TGACCTYA--------
 A C G T A T C G C T G A A G C T A G T C A C G T C T A G A G C T G A C T A C T G A G T C G T C A C A G T T A C G A C G T A C T G
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGABCTGTTGCATVTG
---GCTGTG-------
 A C G T A T C G C T G A A G C T A G T C A C G T C T A G A G C T G A C T A C T G A G T C G T C A C A G T T A C G A C G T A C T G
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGABCTGTTGCATVTG
TGACCT----------
 A C G T A T C G C T G A A G C T A G T C A C G T C T A G A G C T G A C T A C T G A G T C G T C A C A G T T A C G A C G T A C T G
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGABCTGTTGCATVTG-----
----NNNNAGCAGCTGCTGAN
 A C G T A T C G C T G A A G C T A G T C A C G T C T A G A G C T G A C T A C T G A G T C G T C A C A G T T A C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGABCTGTTGCATVTG
-CAGCTGTTTCCT---
 A C G T A T C G C T G A A G C T A G T C A C G T C T A G A G C T G A C T A C T G A G T C G T C A C A G T T A C G A C G T A C T G
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGABCTGTTGCATVTG
TGACCTTTGCCCTA--
 A C G T A T C G C T G A A G C T A G T C A C G T C T A G A G C T G A C T A C T G A G T C G T C A C A G T T A C G A C G T A C T G
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.52
Offset:9
Orientation:forward strand
Alignment:TGABCTGTTGCATVTG-
---------CCATATGT
 A C G T A T C G C T G A A G C T A G T C A C G T C T A G A G C T G A C T A C T G A G T C G T C A C A G T T A C G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T