Information for 9-AGCAAGTCCCTGC (Motif 12)

C G T A A C T G G A T C C G T A C G T A A C T G A C G T A G T C A G T C A G T C C A G T A C T G A G T C
Reverse Opposite:
A C T G A G T C G C T A A C T G A C T G A C T G C G T A T A G C A C G T A C G T C A T G A G T C A C G T
p-value:1e-10
log p-value:-2.368e+01
Information Content per bp:1.870
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.6 +/- 21.8bp
Average Position of motif in Background49.8 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCAAGTCCCTGC
GGAAATTCCC---
 C G T A A C T G G A T C C G T A C G T A A C T G A C G T A G T C A G T C A G T C C A G T A C T G A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCAAGTCCCTGC
GGAAATTCCC---
 C G T A A C T G G A T C C G T A C G T A A C T G A C G T A G T C A G T C A G T C C A G T A C T G A G T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGCAAGTCCCTGC
---AAATCACTGC
 C G T A A C T G G A T C C G T A C G T A A C T G A C G T A G T C A G T C A G T C C A G T A C T G A G T C
A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGCAAGTCCCTGC-
---AAATCACAGCA
 C G T A A C T G G A T C C G T A C G T A A C T G A C G T A G T C A G T C A G T C C A G T A C T G A G T C A C G T
A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGCAAGTCCCTGC
GGAAATCCCC---
 C G T A A C T G G A T C C G T A C G T A A C T G A C G T A G T C A G T C A G T C C A G T A C T G A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCAAGTCCCTGC
-GGAAANCCCC--
 C G T A A C T G G A T C C G T A C G T A A C T G A C G T A G T C A G T C A G T C C A G T A C T G A G T C
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCAAGTCCCTGC
GGGAAATCCCCN--
 A C G T C G T A A C T G G A T C C G T A C G T A A C T G A C G T A G T C A G T C A G T C C A G T A C T G A G T C
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGCAAGTCCCTGC
ANCAGGAAGT------
 A C G T A C G T A C G T C G T A A C T G G A T C C G T A C G T A A C T G A C G T A G T C A G T C A G T C C A G T A C T G A G T C
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGCAAGTCCCTGC-
----ATTTCCTGTN
 C G T A A C T G G A T C C G T A C G T A A C T G A C G T A G T C A G T C A G T C C A G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGCAAGTCCCTGC
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T C G T A A C T G G A T C C G T A C G T A A C T G A C G T A G T C A G T C A G T C C A G T A C T G A G T C
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T