Information for 3-TGTGTAAATTMAGTTT (Motif 3)

A C G T A C T G A C G T A C T G A C G T C G T A C G T A G T C A A G C T A C G T G T C A C G T A A C T G A G C T A G C T A C G T
Reverse Opposite:
C G T A C T G A C T G A G T A C C G A T A C G T T C G A C T G A A C G T C G A T C G A T G T C A A G T C G T C A G T A C C G T A
p-value:1e-13
log p-value:-3.161e+01
Information Content per bp:1.753
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.9 +/- 22.6bp
Average Position of motif in Background35.4 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F2/MA0787.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGTGTAAATTMAGTTT
TTATGCAAATTA-----
 A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A G T C A A G C T A C G T G T C A C G T A A C T G A G C T A G C T A C G T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGTGTAAATTMAGTTT
TTATGCAAATTA-----
 A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A G T C A A G C T A C G T G T C A C G T A A C T G A G C T A G C T A C G T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T A C G T A C G T

PH0174.1_Vax1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTAAATTMAGTTT
CTNNGNTAATTAACNT-
 A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A G T C A A G C T A C G T G T C A C G T A A C T G A G C T A G C T A C G T
G A T C G C A T C T A G C T A G T C A G A G C T G A C T G T C A G C T A C G A T C A G T C T G A C G T A A G T C A T C G A C G T A C G T

Hoxd3/MA0912.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTGTAAATTMAGTTT
TTGAGTTAATTAACCT-
 A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A G T C A A G C T A C G T G T C A C G T A A C T G A G C T A G C T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T A C G T

PH0079.1_Hoxd3/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTGTAAATTMAGTTT
TTGAGTTAATTAACCT-
 A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A G T C A A G C T A C G T G T C A C G T A A C T G A G C T A G C T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGTGTAAATTMAGTTT
AATATGCAAATTAG----
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A G T C A A G C T A C G T G T C A C G T A A C T G A G C T A G C T A C G T
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGTGTAAATTMAGTTT
AATATGCAAATT------
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A G T C A A G C T A C G T G T C A C G T A A C T G A G C T A G C T A C G T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGTGTAAATTMAGTTT
TATGCAAAT-------
 A C G T A C T G A C G T A C T G A C G T C G T A C G T A G T C A A G C T A C G T G T C A C G T A A C T G A G C T A G C T A C G T
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGTGTAAATTMAGTTT
ATTATGCTAATTT-----
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A G T C A A G C T A C G T G T C A C G T A A C T G A G C T A G C T A C G T
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGTGTAAATTMAGTTT
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A G T C A A G C T A C G T G T C A C G T A A C T G A G C T A G C T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T A C G T