Information for 8-RAGTAYATACTWC (Motif 19)

C T G A C G T A A C T G A C G T C G T A A G C T C G T A A C G T C G T A A G T C A G C T G C A T A G T C
Reverse Opposite:
A C T G C G A T C T G A A C T G A C G T C G T A A C G T C T G A A C G T C G T A A G T C A C G T G A C T
p-value:1e-9
log p-value:-2.075e+01
Information Content per bp:1.890
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.6 +/- 29.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:1
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------RAGTAYATACTWC-
NNNGGGHAGCAHRTGCTRCC
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C T G A C G T C G T A A G C T C G T A A C G T C G T A A G T C A G C T G C A T A G T C A C G T
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-RAGTAYATACTWC
WAAGTAAAYA----
 A C G T C T G A C G T A A C T G A C G T C G T A A G C T C G T A A C G T C G T A A G T C A G C T G C A T A G T C
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-RAGTAYATACTWC
AAAGTAAACA----
 A C G T C T G A C G T A A C T G A C G T C G T A A G C T C G T A A C G T C G T A A G T C A G C T G C A T A G T C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RAGTAYATACTWC
AAAGTAAACA----
 A C G T C T G A C G T A A C T G A C G T C G T A A G C T C G T A A C G T C G T A A G T C A G C T G C A T A G T C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----RAGTAYATACTWC
TTATTAGTACATAN---
 A C G T A C G T A C G T A C G T C T G A C G T A A C T G A C G T C G T A A G C T C G T A A C G T C G T A A G T C A G C T G C A T A G T C
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---RAGTAYATACTWC
NCTAAGTAAACA----
 A C G T A C G T A C G T C T G A C G T A A C T G A C G T C G T A A G C T C G T A A C G T C G T A A G T C A G C T G C A T A G T C
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RAGTAYATACTWC---
GATAACATCCTAGTAG
 C T G A C G T A A C T G A C G T C G T A A G C T C G T A A C G T C G T A A G T C A G C T G C A T A G T C A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

FOXB1/MA0845.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-RAGTAYATACTWC
TATGTAAATAT---
 A C G T C T G A C G T A A C T G A C G T C G T A A G C T C G T A A C G T C G T A A G T C A G C T G C A T A G T C
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:RAGTAYATACTWC
AAGGATATNTN--
 C T G A C G T A A C T G A C G T C G T A A G C T C G T A A C G T C G T A A G T C A G C T G C A T A G T C
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----RAGTAYATACTWC
NATTTAAGTACTTANNA-
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C T G A C G T C G T A A G C T C G T A A C G T C G T A A G T C A G C T G C A T A G T C
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A A C G T