Information for 5-TGGCAACACC (Motif 8)

A C G T C T A G C A T G A G T C G T C A T C G A A G T C C T G A G T A C A G T C
Reverse Opposite:
A C T G C A T G G A C T C T A G A G C T C A G T A C T G G T A C A G T C G T C A
p-value:1e-11
log p-value:-2.649e+01
Information Content per bp:1.826
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.24%
Number of Background Sequences with motif226.5
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets48.5 +/- 25.0bp
Average Position of motif in Background47.5 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGGCAACACC-----
NNGGCGACACCTCNNN
 A C G T A C G T C T A G C A T G A G T C G T C A T C G A A G T C C T G A G T A C A G T C A C G T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAACACC
SCTGTCARCACC
 A C G T A C G T A C G T C T A G C A T G A G T C G T C A T C G A A G T C C T G A G T A C A G T C
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGGCAACACC
TTGCAACATN
 A C G T C T A G C A T G A G T C G T C A T C G A A G T C C T G A G T A C A G T C
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TGGCAACACC
SCCTAGCAACAG-
 A C G T A C G T A C G T A C G T C T A G C A T G A G T C G T C A T C G A A G T C C T G A G T A C A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TGGCAACACC---
-GGCCACACCCAN
 A C G T C T A G C A T G A G T C G T C A T C G A A G T C C T G A G T A C A G T C A C G T A C G T A C G T
A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TGGCAACACC--
-GGCCACACCCA
 A C G T C T A G C A T G A G T C G T C A T C G A A G T C C T G A G T A C A G T C A C G T A C G T
A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TGGCAACACC--
--GCCACACCCA
 A C G T C T A G C A T G A G T C G T C A T C G A A G T C C T G A G T A C A G T C A C G T A C G T
A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGGCAACACC---
-GGCCACRCCCMK
 A C G T C T A G C A T G A G T C G T C A T C G A A G T C C T G A G T A C A G T C A C G T A C G T A C G T
A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAACACC
CTTGGCAA----
 A C G T A C G T A C G T C T A G C A T G A G T C G T C A T C G A A G T C C T G A G T A C A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:10
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------TGGCAACACC
GTTGCCATGGCAAC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G A G T C G T C A T C G A A G T C C T G A G T A C A G T C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T