Information for 5-MACACATAAATCASCA (Motif 5)

G T C A G T C A G T A C C G T A A G T C C T G A A C G T C G T A C G T A G C T A C G A T A G T C C G T A A T G C A G T C G T C A
Reverse Opposite:
A C G T A C T G T A C G C G A T A C T G C G T A C A G T C G A T C G A T G T C A A G C T A C T G C G A T A C T G A C G T C A G T
p-value:1e-13
log p-value:-3.165e+01
Information Content per bp:1.736
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.5 +/- 21.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa9/MA0594.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:MACACATAAATCASCA
--GCCATAAATCA---
 G T C A G T C A G T A C C G T A A G T C C T G A A C G T C G T A C G T A G C T A C G A T A G T C C G T A A T G C A G T C G T C A
A C G T A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:MACACATAAATCASCA
---TCATCAATCA---
 G T C A G T C A G T A C C G T A A G T C C T G A A C G T C G T A C G T A G C T A C G A T A G T C C G T A A T G C A G T C G T C A
A C G T A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:MACACATAAATCASCA
-GGCCATAAATCA---
 G T C A G T C A G T A C C G T A A G T C C T G A A C G T C G T A C G T A G C T A C G A T A G T C C G T A A T G C A G T C G T C A
A C G T C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:MACACATAAATCASCA
-RGCCATYAATCA---
 G T C A G T C A G T A C C G T A A G T C C T G A A C G T C G T A C G T A G C T A C G A T A G T C C G T A A T G C A G T C G T C A
A C G T C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:MACACATAAATCASCA
-GGCCATAAATCAC--
 G T C A G T C A G T A C C G T A A G T C C T G A A C G T C G T A C G T A G C T A C G A T A G T C C G T A A T G C A G T C G T C A
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:MACACATAAATCASCA-
-----ATGACTCAGCAD
 G T C A G T C A G T A C C G T A A G T C C T G A A C G T C G T A C G T A G C T A C G A T A G T C C G T A A T G C A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:MACACATAAATCASCA
-GGCCATAAATCA---
 G T C A G T C A G T A C C G T A A G T C C T G A A C G T C G T A C G T A G C T A C G A T A G T C C G T A A T G C A G T C G T C A
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:MACACATAAATCASCA
----GATGACTCAGCA
 G T C A G T C A G T A C C G T A A G T C C T G A A C G T C G T A C G T A G C T A C G A T A G T C C G T A A T G C A G T C G T C A
A C G T A C G T A C G T A C G T T A C G T C G A C A G T A C T G G C T A A T G C C G A T G T A C C G T A A C T G T A G C C G T A

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:MACACATAAATCASCA----
-----ATGACTCAGCANWWT
 G T C A G T C A G T A C C G T A A G T C C T G A A C G T C G T A C G T A G C T A C G A T A G T C C G T A A T G C A G T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C T G C G T A T A G C G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:MACACATAAATCASCA----
-----CTGAGTCAGCAATTT
 G T C A G T C A G T A C C G T A A G T C C T G A A C G T C G T A C G T A G C T A C G A T A G T C C G T A A T G C A G T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T