Information for 23-GCCAGTGTAAACC (Motif 40)

A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T A C T G A C T G A G T C
p-value:1e-6
log p-value:-1.433e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.7 +/- 23.7bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2/MA0047.2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCCAGTGTAAACC
-NCTAAGTAAACA
 A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A G T C
A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCCAGTGTAAACC--
NNNVCTGWGYAAACASN
 A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCCAGTGTAAACC---
-NCWRWGTAAACANSV
 A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGTGTAAACC--
TGCCAAAATAAACANN
 A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCCAGTGTAAACC----
--CAAAGTAAACANNNN
 A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCCAGTGTAAACC
-----DGTAAACA
 A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCCAGTGTAAACC--
---TATGTAAACANG
 A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCCAGTGTAAACC--
---WWTRTAAACAVG
 A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

FOXO3/MA0157.2/Jaspar

Match Rank:9
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GCCAGTGTAAACC-
------GTAAACAA
 A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A

FOXI1/MA0042.2/Jaspar

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GCCAGTGTAAACC
------GTAAACA
 A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G C A T T G C A G T C A C G T A G A T C T C G A