Information for 10-TGAGAATAAAGCA (Motif 18)

A G C T C T A G C G T A A C T G C G T A C T G A A G C T C G T A C T G A C T G A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G C T A G C T C G A T C T G A A G C T A C G T A G T C A C G T A G T C C T G A
p-value:1e-10
log p-value:-2.331e+01
Information Content per bp:1.843
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.9 +/- 25.1bp
Average Position of motif in Background41.0 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGAGAATAAAGCA---
ATAAGAACAAAGGACTA
 A C G T A G C T C T A G C G T A A C T G C G T A C T G A A G C T C G T A C T G A C T G A A C T G A G T C C G T A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGAGAATAAAGCA---
AGAAGAACAAAGGACTA
 A C G T A G C T C T A G C G T A A C T G C G T A C T G A A G C T C G T A C T G A C T G A A C T G A G T C C G T A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGAGAATAAAGCA
--GGAACAAAGR-
 A G C T C T A G C G T A A C T G C G T A C T G A A G C T C G T A C T G A C T G A A C T G A G T C C G T A
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

LEF1/MA0768.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGAGAATAAAGCA--
AAAGATCAAAGGGTT
 A G C T C T A G C G T A A C T G C G T A C T G A A G C T C G T A C T G A C T G A A C T G A G T C C G T A A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGAGAATAAAGCA---
NNNAGATCAAAGGANNN
 A C G T A G C T C T A G C G T A A C T G C G T A C T G A A G C T C G T A C T G A C T G A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGAGAATAAAGCA-
WYATGCATWATGCAT
 A C G T A G C T C T A G C G T A A C T G C G T A C T G A A G C T C G T A C T G A C T G A A C T G A G T C C G T A A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGAGAATAAAGCA---
NANAGATCAAAGGGNNN
 A C G T A G C T C T A G C G T A A C T G C G T A C T G A A G C T C G T A C T G A C T G A A C T G A G T C C G T A A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGAGAATAAAGCA-
--TGAATTATGCAT
 A G C T C T A G C G T A A C T G C G T A C T G A A G C T C G T A C T G A C T G A A C T G A G T C C G T A A C G T
A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

Tcf7/MA0769.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGAGAATAAAGCA
AAAGATCAAAGG-
 A G C T C T A G C G T A A C T G C G T A C T G A A G C T C G T A C T G A C T G A A C T G A G T C C G T A
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGAGAATAAAGCA---
TATAGATCAAAGGAAAA
 A C G T A G C T C T A G C G T A A C T G C G T A C T G A A G C T C G T A C T G A C T G A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A