Information for 3-CTCTGCTGCCCCC (Motif 2)

G T A C A C G T A G T C A C G T A C T G A T G C A G C T A C T G A T G C G T A C G A T C G T A C G T A C
Reverse Opposite:
A C T G C A T G C A T G A C T G T A C G A G T C C T G A A T C G A G T C C G T A C T A G C G T A A C T G
p-value:1e-24
log p-value:-5.712e+01
Information Content per bp:1.797
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif41.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets52.5 +/- 22.0bp
Average Position of motif in Background50.5 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCTGCTGCCCCC
AATTTGCTGAC---
 A C G T G T A C A C G T A G T C A C G T A C T G A T G C A G C T A C T G A T G C G T A C G A T C G T A C G T A C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTCTGCTGCCCCC
---TGCTGACTCA
 G T A C A C G T A G T C A C G T A C T G A T G C A G C T A C T G A T G C G T A C G A T C G T A C G T A C
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

PAX5/MA0014.2/Jaspar

Match Rank:3
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CTCTGCTGCCCCC
GTCACGCTTGGCTGCNCNN
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A G T C A C G T A C T G A T G C A G C T A C T G A T G C G T A C G A T C G T A C G T A C
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCTGCTGCCCCC--
GTCWGCTGTYYCTCT
 G T A C A C G T A G T C A C G T A C T G A T G C A G C T A C T G A T G C G T A C G A T C G T A C G T A C A C G T A C G T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CTCTGCTGCCCCC-
-----ATGCCCACC
 G T A C A C G T A G T C A C G T A C T G A T G C A G C T A C T G A T G C G T A C G A T C G T A C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0041.1_Mafb_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTCTGCTGCCCCC--
AAATTTGCTGACTTAGA
 A C G T A C G T G T A C A C G T A G T C A C G T A C T G A T G C A G C T A C T G A T G C G T A C G A T C G T A C G T A C A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTCTGCTGCCCCC
--CAGCTGNT---
 G T A C A C G T A G T C A C G T A C T G A T G C A G C T A C T G A T G C G T A C G A T C G T A C G T A C
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTCTGCTGCCCCC
---TGGGGCCCAC
 G T A C A C G T A G T C A C G T A C T G A T G C A G C T A C T G A T G C G T A C G A T C G T A C G T A C
A C G T A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTCTGCTGCCCCC-
-----CTGCCCGCA
 G T A C A C G T A G T C A C G T A C T G A T G C A G C T A C T G A T G C G T A C G A T C G T A C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------CTCTGCTGCCCCC
TAGCGCCCCCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A G T C A C G T A C T G A T G C A G C T A C T G A T G C G T A C G A T C G T A C G T A C
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T