Information for 6-TGTGCACAAT (Motif 10)

A G C T A C T G A G C T C T A G T A G C C G T A T A G C G T C A T G C A A C G T
Reverse Opposite:
T G C A A C G T C A G T A T C G G C A T A T C G G A T C C T G A T G A C T C G A
p-value:1e-7
log p-value:-1.662e+01
Information Content per bp:1.633
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif145.9
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets49.6 +/- 26.2bp
Average Position of motif in Background45.9 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGCACAAT--
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G C T C T A G T A G C C G T A T A G C G T C A T G C A A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGCACAAT--
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G C T C T A G T A G C C G T A T A G C G T C A T G C A A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------TGTGCACAAT
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G C T C T A G T A G C C G T A T A G C G T C A T G C A A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGTGCACAAT-----
CTCACACAATGGCGC
 A G C T A C T G A G C T C T A G T A G C C G T A T A G C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGTGCACAAT---
----GACAATGNN
 A G C T A C T G A G C T C T A G T A G C C G T A T A G C G T C A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

MTF1/MA0863.1/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TGTGCACAAT
GTGCCGTGTGCAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G C T C T A G T A G C C G T A T A G C G T C A T G C A A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTGCACAAT-------
NNTNNACAATGGGANNN
 A G C T A C T G A G C T C T A G T A G C C G T A T A G C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGTGCACAAT---
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T A G C T A C T G A G C T C T A G T A G C C G T A T A G C G T C A T G C A A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTGCACAAT-----
TCACGGAACAATAGGTG
 A C G T A C G T A G C T A C T G A G C T C T A G T A G C C G T A T A G C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGTGCACAAT
-GTAAACAAT
 A G C T A C T G A G C T C T A G T A G C C G T A T A G C G T C A T G C A A C G T
A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T