Information for 5-CWCCTGCSAAYAMKGM (Motif 5)

A G T C C G A T A G T C A G T C A C G T A C T G A G T C A T G C C G T A C G T A A G T C C G T A G T C A A C T G C T A G G T C A
Reverse Opposite:
A C G T A G T C G T A C A C G T A C G T C T A G A C G T A C G T A T C G C T A G G T A C C G T A A C T G C T A G C G T A A C T G
p-value:1e-10
log p-value:-2.397e+01
Information Content per bp:1.832
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.5 +/- 29.3bp
Average Position of motif in Background71.5 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CWCCTGCSAAYAMKGM
SNGCACCTGCHS-------
 A C G T A C G T A C G T A G T C C G A T A G T C A G T C A C G T A C T G A G T C A T G C C G T A C G T A A G T C C G T A G T C A A C T G C T A G G T C A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CWCCTGCSAAYAMKGM
NNCACCTGNN--------
 A C G T A C G T A G T C C G A T A G T C A G T C A C G T A C T G A G T C A T G C C G T A C G T A A G T C C G T A G T C A A C T G C T A G G T C A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CWCCTGCSAAYAMKGM
TACACCTGTC--------
 A C G T A C G T A G T C C G A T A G T C A G T C A C G T A C T G A G T C A T G C C G T A C G T A A G T C C G T A G T C A A C T G C T A G G T C A
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CWCCTGCSAAYAMKGM
AACACCTGCT--------
 A C G T A C G T A G T C C G A T A G T C A G T C A C G T A C T G A G T C A T G C C G T A C G T A A G T C C G T A G T C A A C T G C T A G G T C A
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CWCCTGCSAAYAMKGM
CGCACCTGCT--------
 A C G T A C G T A G T C C G A T A G T C A G T C A C G T A C T G A G T C A T G C C G T A C G T A A G T C C G T A G T C A A C T G C T A G G T C A
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CWCCTGCSAAYAMKGM
--GGTGCCAAGT----
 A G T C C G A T A G T C A G T C A C G T A C T G A G T C A T G C C G T A C G T A A G T C C G T A G T C A A C T G C T A G G T C A
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CWCCTGCSAAYAMKGM
NCACCTGTN--------
 A C G T A G T C C G A T A G T C A G T C A C G T A C T G A G T C A T G C C G T A C G T A A G T C C G T A G T C A A C T G C T A G G T C A
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CWCCTGCSAAYAMKGM
AAAGACCTGTCAATAC---
 A C G T A C G T A C G T A G T C C G A T A G T C A G T C A C G T A C T G A G T C A T G C C G T A C G T A A G T C C G T A G T C A A C T G C T A G G T C A
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------CWCCTGCSAAYAMKGM
NNTNCGCACCTGTNGAN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A G T C A G T C A C G T A C T G A G T C A T G C C G T A C G T A A G T C C G T A G T C A A C T G C T A G G T C A
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T A C G T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CWCCTGCSAAYAMKGM
AATTACCTGTCAATAC---
 A C G T A C G T A C G T A G T C C G A T A G T C A G T C A C G T A C T G A G T C A T G C C G T A C G T A A G T C C G T A G T C A A C T G C T A G G T C A
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T A C G T A C G T