Information for 7-GGGGGAATTCCCT (Motif 13)

T C A G C T A G A C T G A C T G C T A G G T C A C G T A C G A T A C G T A G T C A G T C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A G T C A G T C A G T C A G T C A G T C
p-value:1e-7
log p-value:-1.841e+01
Information Content per bp:1.919
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.2 +/- 7.6bp
Average Position of motif in Background58.8 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GGGGGAATTCCCT
GGGGGAATCCCC-
 T C A G C T A G A C T G A C T G C T A G G T C A C G T A C G A T A C G T A G T C A G T C A G T C A G C T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.84
Offset:0
Orientation:forward strand
Alignment:GGGGGAATTCCCT
NGGGGATTTCCC-
 T C A G C T A G A C T G A C T G C T A G G T C A C G T A C G A T A C G T A G T C A G T C A G T C A G C T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GGGGGAATTCCCT
AGGGGAATCCCCT
 T C A G C T A G A C T G A C T G C T A G G T C A C G T A C G A T A C G T A G T C A G T C A G T C A G C T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GGGGGAATTCCCT
AGGGGATTCCCCT
 T C A G C T A G A C T G A C T G C T A G G T C A C G T A C G A T A C G T A G T C A G T C A G T C A G C T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GGGGGAATTCCCT
--GGGAATTTCC-
 T C A G C T A G A C T G A C T G C T A G G T C A C G T A C G A T A C G T A G T C A G T C A G T C A G C T
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GGGGGAATTCCCT
-GGGGATTTCC--
 T C A G C T A G A C T G A C T G C T A G G T C A C G T A C G A T A C G T A G T C A G T C A G T C A G C T
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GGGGGAATTCCCT
-GGGGATTTCC--
 T C A G C T A G A C T G A C T G C T A G G T C A C G T A C G A T A C G T A G T C A G T C A G T C A G C T
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GGGGGAATTCCCT
--GGGAATTTCC-
 T C A G C T A G A C T G A C T G C T A G G T C A C G T A C G A T A C G T A G T C A G T C A G T C A G C T
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:9
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------GGGGGAATTCCCT
ANTNCCGGGGGGAANTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G A C T G A C T G C T A G G T C A C G T A C G A T A C G T A G T C A G T C A G T C A G C T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GGGGGAATTCCCT-
----GCATTCCAGN
 T C A G C T A G A C T G A C T G C T A G G T C A C G T A C G A T A C G T A G T C A G T C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G