Information for 6-CAAAACACATTCC (Motif 6)

A G T C G C T A G C T A C G T A G T C A A G T C C G T A G T A C G C T A A C G T A C G T A G T C G A T C
Reverse Opposite:
C A T G A C T G C G T A C G T A C A G T A C T G A C G T A C T G C A G T G C A T C A G T C A G T C T A G
p-value:1e-14
log p-value:-3.443e+01
Information Content per bp:1.784
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif14.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.1 +/- 23.3bp
Average Position of motif in Background51.8 +/- 40.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD1/MA0090.2/Jaspar

Match Rank:1
Score:0.78
Offset:5
Orientation:forward strand
Alignment:CAAAACACATTCC--
-----CACATTCCAT
 A G T C G C T A G C T A C G T A G T C A A G T C C G T A G T A C G C T A A C G T A C G T A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

TEAD4/MA0809.1/Jaspar

Match Rank:2
Score:0.77
Offset:5
Orientation:forward strand
Alignment:CAAAACACATTCC--
-----CACATTCCAT
 A G T C G C T A G C T A C G T A G T C A A G T C C G T A G T A C G C T A A C G T A C G T A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

TEAD3/MA0808.1/Jaspar

Match Rank:3
Score:0.74
Offset:6
Orientation:forward strand
Alignment:CAAAACACATTCC-
------ACATTCCA
 A G T C G C T A G C T A C G T A G T C A A G T C C G T A G T A C G C T A A C G T A C G T A G T C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.71
Offset:6
Orientation:reverse strand
Alignment:CAAAACACATTCC---
------RCATTCCWGG
 A G T C G C T A G C T A C G T A G T C A A G T C C G T A G T A C G C T A A C G T A C G T A G T C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:5
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:CAAAACACATTCC---
------RCATTCCWGG
 A G T C G C T A G C T A C G T A G T C A A G T C C G T A G T A C G C T A A C G T A C G T A G T C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:CAAAACACATTCC---
------GCATTCCAGN
 A G T C G C T A G C T A C G T A G T C A A G T C C G T A G T A C G C T A A C G T A C G T A G T C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAAAACACATTCC------
--GACCACATTCATACAAT
 A G T C G C T A G C T A C G T A G T C A A G T C C G T A G T A C G C T A A C G T A C G T A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAAAACACATTCC
NWAACCACADNN-
 A G T C G C T A G C T A C G T A G T C A A G T C C G T A G T A C G C T A A C G T A C G T A G T C G A T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAAAACACATTCC
AACACCAAAACAAAGGA-
 A C G T A C G T A C G T A C G T A C G T A G T C G C T A G C T A C G T A G T C A A G T C C G T A G T A C G C T A A C G T A C G T A G T C G A T C
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAAAACACATTCC
NAAACCACAG---
 A G T C G C T A G C T A C G T A G T C A A G T C C G T A G T A C G C T A A C G T A C G T A G T C G A T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T