Information for 17-CATGTAAGTTTCC (Motif 22)

A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C G T A C G T A A G T C A C G T A C G T C G T A A G T C C G T A A C G T A C T G
p-value:1e-7
log p-value:-1.676e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.8 +/- 21.4bp
Average Position of motif in Background65.5 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0082.1_Irx2/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CATGTAAGTTTCC
TAAATACATGTAAAATT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A G T C A G T C
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CATGTAAGTTTCC
AAAATACATGTAAAAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A G T C A G T C
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CATGTAAGTTTCC
AATATACATGTAATATA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A G T C A G T C
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CATGTAAGTTTCC
AAAATACATGTAATACT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A G T C A G T C
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATGTAAGTTTCC
CAGGTAAGTAT--
 A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A G T C A G T C
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CATGTAAGTTTCC
AATATACATGTAAAATT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A G T C A G T C
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CATGTAAGTTTCC
AATATACATGTAAAACA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A G T C A G T C
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CATGTAAGTTTCC---
------ATTTTCCATT
 A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CATGTAAGTTTCC---
------ATTTTCCATT
 A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CATGTAAGTTTCC---
------ATTTTCCATT
 A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T