Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-74 | -1.711e+02 | 0.0000 | 182.0 | 23.58% | 106.0 | 4.60% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-72 | -1.673e+02 | 0.0000 | 212.0 | 27.46% | 149.4 | 6.49% | motif file (matrix) |
svg |
3 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-65 | -1.516e+02 | 0.0000 | 181.0 | 23.45% | 118.2 | 5.13% | motif file (matrix) |
svg |
4 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-54 | -1.260e+02 | 0.0000 | 136.0 | 17.62% | 78.6 | 3.42% | motif file (matrix) |
svg |
5 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-52 | -1.213e+02 | 0.0000 | 85.0 | 11.01% | 27.1 | 1.18% | motif file (matrix) |
svg |
6 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-46 | -1.078e+02 | 0.0000 | 94.0 | 12.18% | 41.4 | 1.80% | motif file (matrix) |
svg |
7 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-44 | -1.014e+02 | 0.0000 | 106.0 | 13.73% | 59.0 | 2.56% | motif file (matrix) |
svg |
8 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-43 | -1.008e+02 | 0.0000 | 145.0 | 18.78% | 111.5 | 4.84% | motif file (matrix) |
svg |
9 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-42 | -9.888e+01 | 0.0000 | 96.0 | 12.44% | 48.4 | 2.10% | motif file (matrix) |
svg |
10 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-42 | -9.869e+01 | 0.0000 | 102.0 | 13.21% | 55.9 | 2.43% | motif file (matrix) |
svg |
11 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-42 | -9.850e+01 | 0.0000 | 94.0 | 12.18% | 46.9 | 2.04% | motif file (matrix) |
svg |
12 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-42 | -9.760e+01 | 0.0000 | 112.0 | 14.51% | 68.3 | 2.97% | motif file (matrix) |
svg |
13 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-40 | -9.337e+01 | 0.0000 | 80.0 | 10.36% | 34.2 | 1.48% | motif file (matrix) |
svg |
14 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-39 | -9.017e+01 | 0.0000 | 69.0 | 8.94% | 25.2 | 1.10% | motif file (matrix) |
svg |
15 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-32 | -7.526e+01 | 0.0000 | 69.0 | 8.94% | 32.9 | 1.43% | motif file (matrix) |
svg |
16 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-27 | -6.310e+01 | 0.0000 | 96.0 | 12.44% | 77.0 | 3.34% | motif file (matrix) |
svg |
17 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-26 | -6.083e+01 | 0.0000 | 99.0 | 12.82% | 83.9 | 3.64% | motif file (matrix) |
svg |
18 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-26 | -6.034e+01 | 0.0000 | 116.0 | 15.03% | 111.0 | 4.82% | motif file (matrix) |
svg |
19 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-25 | -5.785e+01 | 0.0000 | 100.0 | 12.95% | 88.8 | 3.86% | motif file (matrix) |
svg |
20 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-23 | -5.423e+01 | 0.0000 | 61.0 | 7.90% | 36.1 | 1.57% | motif file (matrix) |
svg |
21 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-22 | -5.147e+01 | 0.0000 | 70.0 | 9.07% | 50.0 | 2.17% | motif file (matrix) |
svg |
22 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-20 | -4.812e+01 | 0.0000 | 30.0 | 3.89% | 8.2 | 0.35% | motif file (matrix) |
svg |
23 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-19 | -4.537e+01 | 0.0000 | 109.0 | 14.12% | 121.4 | 5.27% | motif file (matrix) |
svg |
24 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-19 | -4.509e+01 | 0.0000 | 41.0 | 5.31% | 19.6 | 0.85% | motif file (matrix) |
svg |
25 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-19 | -4.417e+01 | 0.0000 | 157.0 | 20.34% | 218.1 | 9.47% | motif file (matrix) |
svg |
26 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-16 | -3.895e+01 | 0.0000 | 117.0 | 15.16% | 148.7 | 6.46% | motif file (matrix) |
svg |
27 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-16 | -3.716e+01 | 0.0000 | 13.0 | 1.68% | 1.1 | 0.05% | motif file (matrix) |
svg |
28 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-15 | -3.561e+01 | 0.0000 | 84.0 | 10.88% | 92.2 | 4.00% | motif file (matrix) |
svg |
29 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-14 | -3.349e+01 | 0.0000 | 12.0 | 1.55% | 1.1 | 0.05% | motif file (matrix) |
svg |
30 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-14 | -3.287e+01 | 0.0000 | 63.0 | 8.16% | 60.9 | 2.65% | motif file (matrix) |
svg |
31 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-14 | -3.253e+01 | 0.0000 | 75.0 | 9.72% | 81.5 | 3.54% | motif file (matrix) |
svg |
32 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-13 | -3.200e+01 | 0.0000 | 41.0 | 5.31% | 28.8 | 1.25% | motif file (matrix) |
svg |
33 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-13 | -3.194e+01 | 0.0000 | 67.0 | 8.68% | 68.3 | 2.97% | motif file (matrix) |
svg |
34 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-11 | -2.746e+01 | 0.0000 | 74.0 | 9.59% | 88.7 | 3.85% | motif file (matrix) |
svg |
35 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-11 | -2.725e+01 | 0.0000 | 24.0 | 3.11% | 11.8 | 0.51% | motif file (matrix) |
svg |
36 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-11 | -2.694e+01 | 0.0000 | 74.0 | 9.59% | 89.6 | 3.89% | motif file (matrix) |
svg |
37 |
| GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-10 | -2.486e+01 | 0.0000 | 15.0 | 1.94% | 4.8 | 0.21% | motif file (matrix) |
svg |
38 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-10 | -2.393e+01 | 0.0000 | 145.0 | 18.78% | 249.2 | 10.82% | motif file (matrix) |
svg |
39 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-10 | -2.366e+01 | 0.0000 | 28.0 | 3.63% | 18.4 | 0.80% | motif file (matrix) |
svg |
40 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-9 | -2.227e+01 | 0.0000 | 45.0 | 5.83% | 45.0 | 1.96% | motif file (matrix) |
svg |
41 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-9 | -2.112e+01 | 0.0000 | 30.0 | 3.89% | 23.5 | 1.02% | motif file (matrix) |
svg |
42 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-8 | -1.976e+01 | 0.0000 | 10.0 | 1.30% | 2.1 | 0.09% | motif file (matrix) |
svg |
43 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-7 | -1.776e+01 | 0.0000 | 12.0 | 1.55% | 4.4 | 0.19% | motif file (matrix) |
svg |
44 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-7 | -1.746e+01 | 0.0000 | 13.0 | 1.68% | 5.2 | 0.23% | motif file (matrix) |
svg |
45 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-7 | -1.704e+01 | 0.0000 | 43.0 | 5.57% | 50.2 | 2.18% | motif file (matrix) |
svg |
46 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-7 | -1.704e+01 | 0.0000 | 9.0 | 1.17% | 2.3 | 0.10% | motif file (matrix) |
svg |
47 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-7 | -1.620e+01 | 0.0000 | 17.0 | 2.20% | 10.4 | 0.45% | motif file (matrix) |
svg |
48 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-6 | -1.399e+01 | 0.0000 | 216.0 | 27.98% | 476.3 | 20.68% | motif file (matrix) |
svg |
49 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-5 | -1.282e+01 | 0.0000 | 30.0 | 3.89% | 34.0 | 1.48% | motif file (matrix) |
svg |
50 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-5 | -1.249e+01 | 0.0000 | 50.0 | 6.48% | 74.3 | 3.23% | motif file (matrix) |
svg |
51 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-4 | -1.147e+01 | 0.0001 | 65.0 | 8.42% | 110.5 | 4.80% | motif file (matrix) |
svg |
52 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-4 | -1.059e+01 | 0.0002 | 96.0 | 12.44% | 187.7 | 8.15% | motif file (matrix) |
svg |
53 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-4 | -1.054e+01 | 0.0002 | 5.0 | 0.65% | 0.8 | 0.04% | motif file (matrix) |
svg |
54 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.234e+00 | 0.0007 | 115.0 | 14.90% | 242.1 | 10.51% | motif file (matrix) |
svg |
55 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-3 | -7.968e+00 | 0.0023 | 8.0 | 1.04% | 5.4 | 0.23% | motif file (matrix) |
svg |
56 |
| NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer | 1e-3 | -7.821e+00 | 0.0026 | 4.0 | 0.52% | 1.5 | 0.07% | motif file (matrix) |
svg |
57 |
| Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.581e+00 | 0.0033 | 16.0 | 2.07% | 18.7 | 0.81% | motif file (matrix) |
svg |
58 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-3 | -7.395e+00 | 0.0039 | 39.0 | 5.05% | 66.0 | 2.87% | motif file (matrix) |
svg |
59 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.389e+00 | 0.0039 | 46.0 | 5.96% | 82.7 | 3.59% | motif file (matrix) |
svg |
60 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.050e+00 | 0.0053 | 106.0 | 13.73% | 233.4 | 10.14% | motif file (matrix) |
svg |
61 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -6.754e+00 | 0.0070 | 47.0 | 6.09% | 87.9 | 3.82% | motif file (matrix) |
svg |
62 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.583e+00 | 0.0081 | 42.0 | 5.44% | 76.7 | 3.33% | motif file (matrix) |
svg |
63 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.508e+00 | 0.0086 | 44.0 | 5.70% | 81.5 | 3.54% | motif file (matrix) |
svg |
64 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-2 | -6.393e+00 | 0.0095 | 28.0 | 3.63% | 45.6 | 1.98% | motif file (matrix) |
svg |
65 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-2 | -6.192e+00 | 0.0115 | 13.0 | 1.68% | 15.0 | 0.65% | motif file (matrix) |
svg |
66 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.183e+00 | 0.0115 | 40.0 | 5.18% | 73.8 | 3.21% | motif file (matrix) |
svg |
67 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-2 | -6.047e+00 | 0.0129 | 125.0 | 16.19% | 291.3 | 12.65% | motif file (matrix) |
svg |
68 |
| NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer | 1e-2 | -6.011e+00 | 0.0131 | 46.0 | 5.96% | 88.9 | 3.86% | motif file (matrix) |
svg |
69 |
| HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.852e+00 | 0.0152 | 8.0 | 1.04% | 7.9 | 0.34% | motif file (matrix) |
svg |
70 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-2 | -5.728e+00 | 0.0169 | 12.0 | 1.55% | 14.5 | 0.63% | motif file (matrix) |
svg |
71 |
| Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer | 1e-2 | -5.651e+00 | 0.0180 | 13.0 | 1.68% | 16.8 | 0.73% | motif file (matrix) |
svg |
72 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-2 | -5.554e+00 | 0.0196 | 9.0 | 1.17% | 9.1 | 0.40% | motif file (matrix) |
svg |
73 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.548e+00 | 0.0196 | 32.0 | 4.15% | 57.9 | 2.52% | motif file (matrix) |
svg |
74 |
| ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.542e+00 | 0.0196 | 35.0 | 4.53% | 64.2 | 2.79% | motif file (matrix) |
svg |
75 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.322e+00 | 0.0234 | 3.0 | 0.39% | 1.6 | 0.07% | motif file (matrix) |
svg |
76 |
| ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.322e+00 | 0.0234 | 3.0 | 0.39% | 1.1 | 0.05% | motif file (matrix) |
svg |
77 |
| ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.314e+00 | 0.0234 | 20.0 | 2.59% | 31.7 | 1.38% | motif file (matrix) |
svg |
78 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -5.168e+00 | 0.0263 | 16.0 | 2.07% | 23.3 | 1.01% | motif file (matrix) |
svg |
79 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-2 | -5.168e+00 | 0.0263 | 16.0 | 2.07% | 23.5 | 1.02% | motif file (matrix) |
svg |
80 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-2 | -5.101e+00 | 0.0277 | 51.0 | 6.61% | 105.7 | 4.59% | motif file (matrix) |
svg |
81 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -5.026e+00 | 0.0295 | 46.0 | 5.96% | 93.8 | 4.07% | motif file (matrix) |
svg |
82 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -5.000e+00 | 0.0299 | 39.0 | 5.05% | 76.6 | 3.33% | motif file (matrix) |
svg |
83 |
| E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer | 1e-2 | -4.902e+00 | 0.0326 | 6.0 | 0.78% | 5.7 | 0.25% | motif file (matrix) |
svg |
84 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -4.881e+00 | 0.0329 | 179.0 | 23.19% | 451.7 | 19.62% | motif file (matrix) |
svg |
85 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-2 | -4.764e+00 | 0.0365 | 62.0 | 8.03% | 135.9 | 5.90% | motif file (matrix) |
svg |
86 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -4.758e+00 | 0.0365 | 45.0 | 5.83% | 92.5 | 4.02% | motif file (matrix) |
svg |
87 |
| Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -4.739e+00 | 0.0366 | 11.0 | 1.42% | 14.4 | 0.63% | motif file (matrix) |
svg |