Information for 21-AAAAGGCATGAMA (Motif 28)

C G T A C T G A G T C A C T G A C T A G C T A G A T G C C G T A A C G T T A C G T G C A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C G T C A A C G T A T C G G A T C A G T C G A C T A C G T A G C T A C G T
p-value:1e-10
log p-value:-2.410e+01
Information Content per bp:1.761
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets53.7 +/- 23.0bp
Average Position of motif in Background47.6 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AAAAGGCATGAMA
ANGNAAAGGTCA-----
 A C G T A C G T A C G T A C G T C G T A C T G A G T C A C T G A C T A G C T A G A T G C C G T A A C G T T A C G T G C A G T A C C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAAAGGCATGAMA
TCTCAAAGGTCACGAG-
 A C G T A C G T A C G T A C G T C G T A C T G A G T C A C T G A C T A G C T A G A T G C C G T A A C G T T A C G T G C A G T A C C G T A
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AAAAGGCATGAMA
TCTCAAAGGTCACCTG-
 A C G T A C G T A C G T A C G T C G T A C T G A G T C A C T G A C T A G C T A G A T G C C G T A A C G T T A C G T G C A G T A C C G T A
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAAGGCATGAMA
AAAAGTCAA----
 C G T A C T G A G T C A C T G A C T A G C T A G A T G C C G T A A C G T T A C G T G C A G T A C C G T A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAAAGGCATGAMA----
-AGAGCCATAAAATTCG
 C G T A C T G A G T C A C T G A C T A G C T A G A T G C C G T A A C G T T A C G T G C A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AAAAGGCATGAMA
GAAAAAATTGCAAGG--
 A C G T A C G T A C G T A C G T C G T A C T G A G T C A C T G A C T A G C T A G A T G C C G T A A C G T T A C G T G C A G T A C C G T A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAAGGCATGAMA
CAAAGGTCAG----
 A C G T C G T A C T G A G T C A C T G A C T A G C T A G A T G C C G T A A C G T T A C G T G C A G T A C C G T A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------AAAAGGCATGAMA
GTAGGGCAAAGGTCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G T C A C T G A C T A G C T A G A T G C C G T A A C G T T A C G T G C A G T A C C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------AAAAGGCATGAMA
TGGGGCAAAGGTCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G T C A C T G A C T A G C T A G A T G C C G T A A C G T T A C G T G C A G T A C C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AAAAGGCATGAMA
TAGGGCAAAGGTCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G T C A C T G A C T A G C T A G A T G C C G T A A C G T T A C G T G C A G T A C C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T A C G T A C G T