Information for 16-AGDGGAGGGTGAA (Motif 18)

C T G A A C T G C G T A A C T G T A C G C G T A C T A G C T A G A C T G A C G T A C T G C T G A G T C A
Reverse Opposite:
A C G T A G C T A G T C G T C A G T A C A G T C A G T C A C G T A T G C G T A C G C A T A G T C A G C T
p-value:1e-16
log p-value:-3.742e+01
Information Content per bp:1.762
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets55.5 +/- 28.4bp
Average Position of motif in Background52.1 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGDGGAGGGTGAA
AGGTCAAGGTCA-
 C T G A A C T G C G T A A C T G T A C G C G T A C T A G C T A G A C T G A C G T A C T G C T G A G T C A
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGDGGAGGGTGAA-
NAGGTCACNNTGACC
 A C G T C T G A A C T G C G T A A C T G T A C G C G T A C T A G C T A G A C T G A C G T A C T G C T G A G T C A A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGDGGAGGGTGAA
AGGTCAAGGTCA-
 C T G A A C T G C G T A A C T G T A C G C G T A C T A G C T A G A C T G A C G T A C T G C T G A G T C A
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGDGGAGGGTGAA
---GGAGGGGGAA
 C T G A A C T G C G T A A C T G T A C G C G T A C T A G C T A G A C T G A C G T A C T G C T G A G T C A
A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

ESR1/MA0112.3/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGDGGAGGGTGAA---
CAGGTCACCGTGACCTT
 A C G T C T G A A C T G C G T A A C T G T A C G C G T A C T A G C T A G A C T G A C G T A C T G C T G A G T C A A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

ESR2/MA0258.2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGDGGAGGGTGAA--
AGGNCANNGTGACCT
 C T G A A C T G C G T A A C T G T A C G C G T A C T A G C T A G A C T G A C G T A C T G C T G A G T C A A C G T A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

PPARG/MA0066.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGDGGAGGGTGAA-----
GTAGGTCACGGTGACCTACT
 A C G T A C G T C T G A A C T G C G T A A C T G T A C G C G T A C T A G C T A G A C T G A C G T A C T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

IRF1/MA0050.2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGDGGAGGGTGAA-------
AAANNGAAAGTGAAAGTAAAN
 A C G T C T G A A C T G C G T A A C T G T A C G C G T A C T A G C T A G A C T G A C G T A C T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGDGGAGGGTGAA
AGAGGAAGTG---
 C T G A A C T G C G T A A C T G T A C G C G T A C T A G C T A G A C T G A C G T A C T G C T G A G T C A
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AGDGGAGGGTGAA--------
---GGAAAGCGAAACCAAAAC
 C T G A A C T G C G T A A C T G T A C G C G T A C T A G C T A G A C T G A C G T A C T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C