Information for 10-GGAAAATGCC (Motif 14)

A C T G T C A G C T G A C T G A C G T A C G T A C A G T A C T G A T G C T A G C
Reverse Opposite:
A C T G A T C G G T A C G C T A C G A T C G A T A G C T A G C T A G T C A G T C
p-value:1e-17
log p-value:-4.109e+01
Information Content per bp:1.835
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets54.0 +/- 21.8bp
Average Position of motif in Background30.5 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAATGCC
TGGAAAA----
 A C G T A C T G T C A G C T G A C T G A C G T A C G T A C A G T A C T G A T G C T A G C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAATGCC
AATGGAAAAT---
 A C G T A C G T A C G T A C T G T C A G C T G A C T G A C G T A C G T A C A G T A C T G A T G C T A G C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGAAAATGCC
GGAAATTCCC
 A C T G T C A G C T G A C T G A C G T A C G T A C A G T A C T G A T G C T A G C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAATGCC
NNTGGAAANN---
 A C G T A C G T A C G T A C T G T C A G C T G A C T G A C G T A C G T A C A G T A C T G A T G C T A G C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAATGCC
NATGGAAAAN---
 A C G T A C G T A C G T A C T G T C A G C T G A C T G A C G T A C G T A C A G T A C T G A T G C T A G C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAATGCC
AATGGAAAAT---
 A C G T A C G T A C G T A C T G T C A G C T G A C T G A C G T A C G T A C A G T A C T G A T G C T A G C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGAAAATGCC
GGAAATTCCC
 A C T G T C A G C T G A C T G A C G T A C G T A C A G T A C T G A T G C T A G C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGAAAATGCC
GGAAATCCCC
 A C T G T C A G C T G A C T G A C G T A C G T A C A G T A C T G A T G C T A G C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGAAAATGCC--
GGGAAATCCCCN
 A C T G T C A G C T G A C T G A C G T A C G T A C A G T A C T G A T G C T A G C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGAAAATGCC
GGAAANCCCC
 A C T G T C A G C T G A C T G A C G T A C G T A C A G T A C T G A T G C T A G C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C