Information for 1-TGTTTRCYTWNNW (Motif 1)

A C G T C T A G A G C T A C G T A C G T C T A G G A T C G A C T G A C T G C T A A C G T A C T G G C T A
Reverse Opposite:
C G A T T G A C T G C A C G A T C T G A C T G A C T A G G A T C T G C A G T C A T C G A A G T C C G T A
p-value:1e-88
log p-value:-2.047e+02
Information Content per bp:1.579
Number of Target Sequences with motif272.0
Percentage of Target Sequences with motif35.23%
Number of Background Sequences with motif207.4
Percentage of Background Sequences with motif9.01%
Average Position of motif in Targets50.0 +/- 25.2bp
Average Position of motif in Background50.4 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:TGTTTRCYTWNNW
TRTTTACTTW---
 A C G T C T A G A G C T A C G T A C G T C T A G G A T C G A C T G A C T G C T A A C G T A C T G G C T A
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCYTWNNW
TGTTTACTTT---
 A C G T C T A G A G C T A C G T A C G T C T A G G A T C G A C T G A C T G C T A A C G T A C T G G C T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCYTWNNW
TGTTTACTTT---
 A C G T C T A G A G C T A C G T A C G T C T A G G A T C G A C T G A C T G C T A A C G T A C T G G C T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.92
Offset:0
Orientation:forward strand
Alignment:TGTTTRCYTWNNW
TGTTTATTT----
 A C G T C T A G A G C T A C G T A C G T C T A G G A T C G A C T G A C T G C T A A C G T A C T G G C T A
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.91
Offset:-4
Orientation:forward strand
Alignment:----TGTTTRCYTWNNW
TCCATGTTTACTTTG--
 A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T A G G A T C G A C T G A C T G C T A A C G T A C T G G C T A
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTRCYTWNNW
TTTGTTTACTTA---
 A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T A G G A T C G A C T G A C T G C T A A C G T A C T G G C T A
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:7
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCYTWNNW
TGTTTAC------
 A C G T C T A G A G C T A C G T A C G T C T A G G A T C G A C T G A C T G C T A A C G T A C T G G C T A
G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.90
Offset:0
Orientation:forward strand
Alignment:TGTTTRCYTWNNW
TGTTTACTTAGG-
 A C G T C T A G A G C T A C G T A C G T C T A G G A T C G A C T G A C T G C T A A C G T A C T G G C T A
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---TGTTTRCYTWNNW
BSNTGTTTACWYWGN-
 A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T A G G A T C G A C T G A C T G C T A A C G T A C T G G C T A
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:10
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCYTWNNW
TGTTTAC------
 A C G T C T A G A G C T A C G T A C G T C T A G G A T C G A C T G A C T G C T A A C G T A C T G G C T A
C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T