Information for 2-GGGCAGGGTGACC (Motif 4)

C A T G A C T G C A T G A T G C C G T A A T C G T C A G A T C G C G A T T C A G T C G A G T A C G A T C
Reverse Opposite:
C T A G A C T G A G C T A G T C C G T A A T G C A G T C T A G C G C A T A T C G G T A C G T A C G T A C
p-value:1e-31
log p-value:-7.324e+01
Information Content per bp:1.738
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.79%
Number of Background Sequences with motif138.0
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets59.0 +/- 20.3bp
Average Position of motif in Background50.3 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-GGGCAGGGTGACC-
AGGNCANNGTGACCT
 A C G T C A T G A C T G C A T G A T G C C G T A A T C G T C A G A T C G C G A T T C A G T C G A G T A C G A T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GGGCAGGGTGACC--
GGTCANNGTGACCTN
 C A T G A C T G C A T G A T G C C G T A A T C G T C A G A T C G C G A T T C A G T C G A G T A C G A T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAGGGTGACC--
CAGGTCACCGTGACCTT
 A C G T A C G T C A T G A C T G C A T G A T G C C G T A A T C G T C A G A T C G C G A T T C A G T C G A G T A C G A T C A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGGGTGACC----
GTAGGTCACGGTGACCTACT
 A C G T A C G T A C G T C A T G A C T G C A T G A T G C C G T A A T C G T C A G A T C G C G A T T C A G T C G A G T A C G A T C A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:GGGCAGGGTGACC-
--------TGACCT
 C A T G A C T G C A T G A T G C C G T A A T C G T C A G A T C G C G A T T C A G T C G A G T A C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGGGTGACC
TNNGGGCAG-------
 A C G T A C G T A C G T C A T G A C T G C A T G A T G C C G T A A T C G T C A G A T C G C G A T T C A G T C G A G T A C G A T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GGGCAGGGTGACC--
-------GTGACCTT
 C A T G A C T G C A T G A T G C C G T A A T C G T C A G A T C G C G A T T C A G T C G A G T A C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:GGGCAGGGTGACC---
--------TGACCYCT
 C A T G A C T G C A T G A T G C C G T A A T C G T C A G A T C G C G A T T C A G T C G A G T A C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGGCAGGGTGACC-------
----NNNNTGACCCGGCGCG
 C A T G A C T G C A T G A T G C C G T A A T C G T C A G A T C G C G A T T C A G T C G A G T A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGCAGGGTGACC
AGGTCAAGGTCA--
 A C G T C A T G A C T G C A T G A T G C C G T A A T C G T C A G A T C G C G A T T C A G T C G A G T A C G A T C
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T