Information for 20-CWCAGGAACAYRS (Motif 27)

A G T C C G A T A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A A G T C C T A G A T C G
Reverse Opposite:
T A G C A G T C C T A G A C G T A C T G A C G T A C G T A G T C A G T C A C G T A C T G C G T A A C T G
p-value:1e-5
log p-value:-1.191e+01
Information Content per bp:1.873
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 30.6bp
Average Position of motif in Background61.0 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CWCAGGAACAYRS
-CCAGGAACAG--
 A G T C C G A T A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A A G T C C T A G A T C G
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CWCAGGAACAYRS
-AGAGGAA-----
 A G T C C G A T A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A A G T C C T A G A T C G
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CWCAGGAACAYRS
SCCTAGCAACAG--
 A C G T A G T C C G A T A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A A G T C C T A G A T C G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CWCAGGAACAYRS
NACAGGAAAT---
 A G T C C G A T A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A A G T C C T A G A T C G
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CWCAGGAACAYRS
ANTTCTCAGGAANNN--
 A C G T A C G T A C G T A C G T A G T C C G A T A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A A G T C C T A G A T C G
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CWCAGGAACAYRS
AACAGGAAGT---
 A G T C C G A T A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A A G T C C T A G A T C G
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CWCAGGAACAYRS
NDCAGGAARTNN-
 A G T C C G A T A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A A G T C C T A G A T C G
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CWCAGGAACAYRS
NACAGGAAAT---
 A G T C C G A T A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A A G T C C T A G A T C G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CWCAGGAACAYRS
-ACAGGAAGTG--
 A G T C C G A T A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A A G T C C T A G A T C G
A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CWCAGGAACAYRS
-ACCGGAAG----
 A G T C C G A T A G T C C G T A A C T G C T A G C G T A C G T A A G T C C G T A A G T C C T A G A T C G
A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T