Information for 14-ARWAWGSCTTGAC (Motif 21)

C G T A C T A G C G T A C G T A C G T A A C T G A T G C G T A C C G A T A C G T A C T G G T C A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A C G T A A C T G A T C G A G T C C G A T A C G T C G A T A G T C A C G T
p-value:1e-9
log p-value:-2.135e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.5 +/- 28.9bp
Average Position of motif in Background39.8 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:ARWAWGSCTTGAC-
------NCGTGACN
 C G T A C T A G C G T A C G T A C G T A A C T G A T G C G T A C C G A T A C G T A C T G G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ARWAWGSCTTGAC-
----TGTCTAGACG
 C G T A C T A G C G T A C G T A C G T A A C T G A T G C G T A C C G A T A C G T A C T G G T C A A G T C A C G T
A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.58
Offset:8
Orientation:forward strand
Alignment:ARWAWGSCTTGAC---
--------TTGACAGG
 C G T A C T A G C G T A C G T A C G T A A C T G A T G C G T A C C G A T A C G T A C T G G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.58
Offset:8
Orientation:forward strand
Alignment:ARWAWGSCTTGAC--
--------TTGACAG
 C G T A C T A G C G T A C G T A C G T A A C T G A T G C G T A C C G A T A C G T A C T G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ARWAWGSCTTGAC---
-CAAAGGCGTGGCCAG
 C G T A C T A G C G T A C G T A C G T A A C T G A T G C G T A C C G A T A C G T A C T G G T C A A G T C A C G T A C G T A C G T
A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.56
Offset:8
Orientation:forward strand
Alignment:ARWAWGSCTTGAC---
--------TTGACAGC
 C G T A C T A G C G T A C G T A C G T A A C T G A T G C G T A C C G A T A C G T A C T G G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:ARWAWGSCTTGAC----
--------TTGACTTTT
 C G T A C T A G C G T A C G T A C G T A A C T G A T G C G T A C C G A T A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ARWAWGSCTTGAC--
---TGACCTTGACCT
 C G T A C T A G C G T A C G T A C G T A A C T G A T G C G T A C C G A T A C G T A C T G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ARWAWGSCTTGAC
---ATGGGGTGAT
 C G T A C T A G C G T A C G T A C G T A A C T G A T G C G T A C C G A T A C G T A C T G G T C A A G T C
A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

PROX1/MA0794.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ARWAWGSCTTGAC
CAAGACGCCTTA--
 A C G T C G T A C T A G C G T A C G T A C G T A A C T G A T G C G T A C C G A T A C G T A C T G G T C A A G T C
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T A C G T