Information for 3-CTGTGGGGCATATTGT (Motif 7)

A G T C A C G T A C T G A C G T C A T G A C T G A C T G A C T G A G T C C G T A C A G T C T G A A G C T A C G T A C T G C G A T
Reverse Opposite:
C G T A A G T C C G T A C T G A A G C T G T C A A C G T A C T G G T A C A G T C A G T C G A T C G T C A G T A C C G T A C T A G
p-value:1e-16
log p-value:-3.696e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.7 +/- 17.4bp
Average Position of motif in Background53.1 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0143.1_Klf7_2/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGTGGGGCATATTGT-
NNNTNGGGCGTATNNTN
 A G T C A C G T A C T G A C G T C A T G A C T G A C T G A C T G A G T C C G T A C A G T C T G A A G C T A C G T A C T G C G A T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CTGTGGGGCATATTGT-
--------CTCATTGTC
 A G T C A C G T A C T G A C G T C A T G A C T G A C T G A C T G A G T C C G T A C A G T C T G A A G C T A C G T A C T G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

Neurog1/MA0623.1/Jaspar

Match Rank:3
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTGTGGGGCATATTGT
------ACCATATGGT
 A G T C A C G T A C T G A C G T C A T G A C T G A C T G A C T G A G T C C G T A C A G T C T G A A G C T A C G T A C T G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTGTGGGGCATATTGT-------
------CNNNTATTGTTCNNNNN
 A G T C A C G T A C T G A C G T C A T G A C T G A C T G A C T G A G T C C G T A C A G T C T G A A G C T A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTGTGGGGCATATTGT
--NGTGGGCAT-----
 A G T C A C G T A C T G A C G T C A T G A C T G A C T G A C T G A G T C C G T A C A G T C T G A A G C T A C G T A C T G C G A T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGGGCATATTGT
NNNNTTGGGCACNNCN-
 A C G T A G T C A C G T A C T G A C G T C A T G A C T G A C T G A C T G A G T C C G T A C A G T C T G A A G C T A C G T A C T G C G A T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CTGTGGGGCATATTGT----
---GGGAACACAATGTTCCC
 A G T C A C G T A C T G A C G T C A T G A C T G A C T G A C T G A G T C C G T A C A G T C T G A A G C T A C G T A C T G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

OLIG3/MA0827.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CTGTGGGGCATATTGT
------ANCATATGGT
 A G T C A C G T A C T G A C G T C A T G A C T G A C T G A C T G A G T C C G T A C A G T C T G A A G C T A C G T A C T G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGGGCATATTGT
GCTGTG-----------
 A C G T A G T C A C G T A C T G A C G T C A T G A C T G A C T G A C T G A G T C C G T A C A G T C T G A A G C T A C G T A C T G C G A T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.51
Offset:11
Orientation:forward strand
Alignment:CTGTGGGGCATATTGT-
-----------ATTGTT
 A G T C A C G T A C T G A C G T C A T G A C T G A C T G A C T G A G T C C G T A C A G T C T G A A G C T A C G T A C T G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T