p-value: | 1e-21 |
log p-value: | -5.024e+01 |
Information Content per bp: | 1.680 |
Number of Target Sequences with motif | 102.0 |
Percentage of Target Sequences with motif | 12.26% |
Number of Background Sequences with motif | 1954.3 |
Percentage of Background Sequences with motif | 4.07% |
Average Position of motif in Targets | 52.6 +/- 26.9bp |
Average Position of motif in Background | 48.8 +/- 30.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.06 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.93 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | NNBMAGGTCA --TRAGGTCA |
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RORA/MA0071.1/Jaspar
Match Rank: | 2 |
Score: | 0.93 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | NNBMAGGTCA ATCAAGGTCA |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 3 |
Score: | 0.93 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | NNBMAGGTCA ----AGGTCA |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 4 |
Score: | 0.92 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | NNBMAGGTCA- ---AAGGTCAC |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 5 |
Score: | 0.92 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | NNBMAGGTCA- -TCAAGGTCAN |
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Esrrg/MA0643.1/Jaspar
Match Rank: | 6 |
Score: | 0.91 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | NNBMAGGTCA- -TCAAGGTCAT |
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PB0014.1_Esrra_1/Jaspar
Match Rank: | 7 |
Score: | 0.87 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --NNBMAGGTCA----- TATTCAAGGTCATGCGA |
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ESRRB/MA0141.3/Jaspar
Match Rank: | 8 |
Score: | 0.87 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | NNBMAGGTCA-- -TCAAGGTCATA |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 9 |
Score: | 0.86 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | NNBMAGGTCA --AGRGGTCA |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 10 |
Score: | 0.85 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | NNBMAGGTCA---- -CAAAGGTCAAGGG |
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