Information for 12-TCCTCTTAAATAG (Motif 19)

G A C T A G T C A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G A T C G T A C T A G
Reverse Opposite:
A G T C A C G T C G T A A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G C G T A
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.6 +/- 16.0bp
Average Position of motif in Background48.4 +/- 2.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0048.1_Hoxa13/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCCTCTTAAATAG-
AAACCTCGTAAAATTT
 A C G T A C G T G A C T A G T C A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G A T C G T A C T A G A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TCCTCTTAAATAG
-GCTCGTAAAAA-
 G A C T A G T C A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G A T C G T A C T A G
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TCCTCTTAAATAG
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C G T G A C T A G T C A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G A T C G T A C T A G
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TCCTCTTAAATAG-
AAAGCTCGTAAAATTT
 A C G T A C G T G A C T A G T C A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G A T C G T A C T A G A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PH0004.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TCCTCTTAAATAG
CATAACCACTTAACAAC
 A C G T A C G T A C G T A C G T G A C T A G T C A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G A T C G T A C T A G
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCCTCTTAAATAG
ACCACTTAA----
 G A C T A G T C A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G A T C G T A C T A G
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCCTCTTAAATAG
ACCACTTAA----
 G A C T A G T C A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G A T C G T A C T A G
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCCTCTTAAATAG
TAAGCCACTTGAATTT
 A C G T A C G T A C G T G A C T A G T C A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G A T C G T A C T A G
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCCTCTTAAATAG
-CCYMATAAAA--
 G A C T A G T C A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G A T C G T A C T A G
A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCCTCTTAAATAG
--GTCGTAAAAA-
 G A C T A G T C A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G A T C G T A C T A G
A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T