Information for 9-GCAGGGTGTA (Motif 18)

A T C G A G T C C G T A C A T G C T A G A T C G A C G T A C T G C A G T T C G A
Reverse Opposite:
A G C T G T C A G T A C G T C A A T G C A G T C G A T C A C G T A C T G A T G C
p-value:1e-10
log p-value:-2.521e+01
Information Content per bp:1.845
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif157.0
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets45.1 +/- 26.3bp
Average Position of motif in Background49.3 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf1/MA0493.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCAGGGTGTA---
--TGGGTGTGGCN
 A T C G A G T C C G T A C A T G C T A G A T C G A C G T A C T G C A G T T C G A A C G T A C G T A C G T
A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCAGGGTGTA---
-NTGGGTGTGGCC
 A T C G A G T C C G T A C A T G C T A G A T C G A C G T A C T G C A G T T C G A A C G T A C G T A C G T
A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCAGGGTGTA
CACAGCAGGGGG--
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C A T G C T A G A T C G A C G T A C T G C A G T T C G A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCAGGGTGTA
CACAGCGGGGGGTC
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C A T G C T A G A T C G A C G T A C T G C A G T T C G A
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGGGTGTA
NCGCAGCGGGGGGTC
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A C A T G C T A G A T C G A C G T A C T G C A G T T C G A
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

GLIS2/MA0736.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCAGGGTGTA
CTTCGCGGGGGGTC
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C A T G C T A G A T C G A C G T A C T G C A G T T C G A
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGGGTGTA
NCNCAGCGGGGGGTC
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A C A T G C T A G A T C G A C G T A C T G C A G T T C G A
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

TBX5/MA0807.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCAGGGTGTA-
---AGGTGTGA
 A T C G A G T C C G T A C A T G C T A G A T C G A C G T A C T G C A G T T C G A A C G T
A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

PB0143.1_Klf7_2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGGTGTA-----
NNNTNGGGCGTATNNTN
 A C G T A C G T A T C G A G T C C G T A C A T G C T A G A T C G A C G T A C T G C A G T T C G A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCAGGGTGTA---
--AAGGTGTGAAA
 A T C G A G T C C G T A C A T G C T A G A T C G A C G T A C T G C A G T T C G A A C G T A C G T A C G T
A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A