Information for 6-GGGACAGCAGGGCGHG (Motif 14)

C A T G C A T G T A C G T C G A A T G C T C G A A C T G A T G C C G T A C T A G A C T G C T A G G T A C C T A G G A T C T A C G
Reverse Opposite:
A T G C C T A G A G T C C A T G A G T C A G T C A G T C C G A T A T C G T G A C A G C T T A C G A G C T A T G C G A T C G T A C
p-value:1e-12
log p-value:-2.886e+01
Information Content per bp:1.658
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif127.6
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets49.5 +/- 26.2bp
Average Position of motif in Background49.9 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGGACAGCAGGGCGHG
--CACAGCAGGGGG--
 C A T G C A T G T A C G T C G A A T G C T C G A A C T G A T G C C G T A C T A G A C T G C T A G G T A C C T A G G A T C T A C G
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGGACAGCAGGGCGHG
-DCHCAGCAGGRGGCC
 C A T G C A T G T A C G T C G A A T G C T C G A A C T G A T G C C G T A C T A G A C T G C T A G G T A C C T A G G A T C T A C G
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.59
Offset:8
Orientation:forward strand
Alignment:GGGACAGCAGGGCGHG--
--------DGGGYGKGGC
 C A T G C A T G T A C G T C G A A T G C T C G A A C T G A T G C C G T A C T A G A C T G C T A G G T A C C T A G G A T C T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGACAGCAGGGCGHG
-NCGCAGCGGGGGGTC
 C A T G C A T G T A C G T C G A A T G C T C G A A C T G A T G C C G T A C T A G A C T G C T A G G T A C C T A G G A T C T A C G
A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGGACAGCAGGGCGHG
--CACAGCGGGGGGTC
 C A T G C A T G T A C G T C G A A T G C T C G A A C T G A T G C C G T A C T A G A C T G C T A G G T A C C T A G G A T C T A C G
A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGGACAGCAGGGCGHG------
--GCCASCAGGGGGCGCYVNNG
 C A T G C A T G T A C G T C G A A T G C T C G A A C T G A T G C C G T A C T A G A C T G C T A G G T A C C T A G G A T C T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGGACAGCAGGGCGHG
-NCNCAGCGGGGGGTC
 C A T G C A T G T A C G T C G A A T G C T C G A A C T G A T G C C G T A C T A G A C T G C T A G G T A C C T A G G A T C T A C G
A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.58
Offset:8
Orientation:forward strand
Alignment:GGGACAGCAGGGCGHG--
--------TGGGTGGGGC
 C A T G C A T G T A C G T C G A A T G C T C G A A C T G A T G C C G T A C T A G A C T G C T A G G T A C C T A G G A T C T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGGACAGCAGGGCGHG
-DCTCAGCAGG-----
 C A T G C A T G T A C G T C G A A T G C T C G A A C T G A T G C C G T A C T A G A C T G C T A G G T A C C T A G G A T C T A C G
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:GGGACAGCAGGGCGHG--
--------GGGGNGGGGC
 C A T G C A T G T A C G T C G A A T G C T C G A A C T G A T G C C G T A C T A G A C T G C T A G G T A C C T A G G A T C T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C