Information for 9-TCTGGAAGGGAVC (Motif 12)

A C G T A G T C A C G T C A T G A C T G G T C A C G T A A C T G A C T G C T A G T G C A T G A C G T A C
Reverse Opposite:
A C T G A C T G A C G T A G T C G T A C A G T C A C G T A C G T A G T C G T A C C G T A C T A G C G T A
p-value:1e-13
log p-value:-3.029e+01
Information Content per bp:1.799
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.5 +/- 26.6bp
Average Position of motif in Background55.7 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCTGGAAGGGAVC
GGTCTGGCAT-----
 A C G T A C G T A C G T A G T C A C G T C A T G A C T G G T C A C G T A A C T G A C T G C T A G T G C A T G A C G T A C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TCTGGAAGGGAVC
---NGAAGC----
 A C G T A G T C A C G T C A T G A C T G G T C A C G T A A C T G A C T G C T A G T G C A T G A C G T A C
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCTGGAAGGGAVC
--TGGAACAGMA-
 A C G T A G T C A C G T C A T G A C T G G T C A C G T A A C T G A C T G C T A G T G C A T G A C G T A C
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

E2F8/MA0865.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCTGGAAGGGAVC
TTTGGCGGGAAA-
 A C G T A G T C A C G T C A T G A C T G G T C A C G T A A C T G A C T G C T A G T G C A T G A C G T A C
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A A C G T

E2F7/MA0758.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCTGGAAGGGAVC
TTTTGGCGGGAAAA
 A C G T A C G T A G T C A C G T C A T G A C T G G T C A C G T A A C T G A C T G C T A G T G C A T G A C G T A C
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCTGGAAGGGAVC--
-CTGGCAGNCTGCCA
 A C G T A G T C A C G T C A T G A C T G G T C A C G T A A C T G A C T G C T A G T G C A T G A C G T A C A C G T A C G T
A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

Gabpa/MA0062.2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCTGGAAGGGAVC
-CCGGAAGTGGC-
 A C G T A G T C A C G T C A T G A C T G G T C A C G T A A C T G A C T G C T A G T G C A T G A C G T A C
A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCTGGAAGGGAVC
-TTGGCA------
 A C G T A G T C A C G T C A T G A C T G G T C A C G T A A C T G A C T G C T A G T G C A T G A C G T A C
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCTGGAAGGGAVC
TGGGGAAGGGCM-
 A C G T A G T C A C G T C A T G A C T G G T C A C G T A A C T G A C T G C T A G T G C A T G A C G T A C
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCTGGAAGGGAVC
CTTGGCAA-----
 A C G T A G T C A C G T C A T G A C T G G T C A C G T A A C T G A C T G C T A G T G C A T G A C G T A C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T