Information for 5-AGAATCAGACAAGCTT (Motif 11)

C T G A A C T G G T C A G T C A A C G T A G T C C G T A A C T G C G T A G A T C C G T A C G T A C T A G G T A C A G C T C G A T
Reverse Opposite:
C G T A C T G A A C T G A G T C A C G T A C G T C T A G A C G T A G T C A C G T A C T G C G T A A C G T A C G T A G T C A G C T
p-value:1e-13
log p-value:-3.095e+01
Information Content per bp:1.915
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 22.9bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.64
Offset:9
Orientation:forward strand
Alignment:AGAATCAGACAAGCTT
---------CAAGCTT
 C T G A A C T G G T C A G T C A A C G T A G T C C G T A A C T G C G T A G A T C C G T A C G T A C T A G G T A C A G C T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGAATCAGACAAGCTT
----BCAGACWA----
 C T G A A C T G G T C A G T C A A C G T A G T C C G T A A C T G C G T A G A T C C G T A C G T A C T A G G T A C A G C T C G A T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AGAATCAGACAAGCTT
-----CAGATAAGGN-
 C T G A A C T G G T C A G T C A A C G T A G T C C G T A A C T G C G T A G A T C C G T A C G T A C T A G G T A C A G C T C G A T
A C G T A C G T A C G T A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T

GATA2/MA0036.2/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGAATCAGACAAGCTT--
----NCAGATAAGAANNN
 C T G A A C T G G T C A G T C A A C G T A G T C C G T A A C T G C G T A G A T C C G T A C G T A C T A G G T A C A G C T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGAATCAGACAAGCTT
-----NAGATAAGNN-
 C T G A A C T G G T C A G T C A A C G T A G T C C G T A A C T G C G T A G A T C C G T A C G T A C T A G G T A C A G C T C G A T
A C G T A C G T A C G T A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGAATCAGACAAGCTT
----NVAGATAAGR--
 C T G A A C T G G T C A G T C A A C G T A G T C C G T A A C T G C G T A G A T C C G T A C G T A C T A G G T A C A G C T C G A T
A C G T A C G T A C G T A C G T T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AGAATCAGACAAGCTT
------AGATAAGA--
 C T G A A C T G G T C A G T C A A C G T A G T C C G T A A C T G C G T A G A T C C G T A C G T A C T A G G T A C A G C T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGAATCAGACAAGCTT---
----SCAGYCADGCATGAC
 C T G A A C T G G T C A G T C A A C G T A G T C C G T A A C T G C G T A G A T C C G T A C G T A C T A G G T A C A G C T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Gata4/MA0482.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGAATCAGACAAGCTT
---NNGAGATAAGA--
 C T G A A C T G G T C A G T C A A C G T A G T C C G T A A C T G C G T A G A T C C G T A C G T A C T A G G T A C A G C T C G A T
A C G T A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGAATCAGACAAGCTT
----CCAGACRSVB--
 C T G A A C T G G T C A G T C A A C G T A G T C C G T A A C T G C G T A G A T C C G T A C G T A C T A G G T A C A G C T C G A T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T