Information for 13-TGACTTGCAT (Motif 19)

A C G T A C T G C G T A A G T C A G C T A C G T A C T G G T A C C G T A G C A T
Reverse Opposite:
C G T A C G A T A C T G T G A C G T C A C T G A A C T G A C G T G T A C G T C A
p-value:1e-9
log p-value:-2.229e+01
Information Content per bp:1.850
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif95.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets55.1 +/- 24.0bp
Average Position of motif in Background48.8 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGACTTGCAT--
TTCATTTGCATAT
 A C G T A C G T A C T G C G T A A G T C A G C T A C G T A C T G G T A C C G T A G C A T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGACTTGCAT
TTGACTTTT--
 A C G T A C G T A C T G C G T A A G T C A G C T A C G T A C T G G T A C C G T A G C A T
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGACTTGCAT-
NNACTTGCCTT
 A C G T A C T G C G T A A G T C A G C T A C G T A C T G G T A C C G T A G C A T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGACTTGCAT--
--ATTTGCATAA
 A C G T A C T G C G T A A G T C A G C T A C G T A C T G G T A C C G T A G C A T A C G T A C G T
A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGACTTGCAT--
--ATTTGCATAT
 A C G T A C T G C G T A A G T C A G C T A C G T A C T G G T A C C G T A G C A T A C G T A C G T
A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Pou2f3/MA0627.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGACTTGCAT----
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C T G C G T A A G T C A G C T A C G T A C T G G T A C C G T A G C A T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGACTTGCAT----
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C T G C G T A A G T C A G C T A C G T A C T G G T A C C G T A G C A T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGACTTGCAT----
TNTAATTTGCATANNN
 A C G T A C G T A C G T A C T G C G T A A G T C A G C T A C G T A C T G G T A C C G T A G C A T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGACTTGCAT-
CTCATTTGCATW
 A C G T A C G T A C T G C G T A A G T C A G C T A C G T A C T G G T A C C G T A G C A T A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGACTTGCAT
TGACCTTGAT
 A C G T A C T G C G T A A G T C A G C T A C G T A C T G G T A C C G T A G C A T
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T