p-value: | 1e-34 |
log p-value: | -8.021e+01 |
Information Content per bp: | 1.718 |
Number of Target Sequences with motif | 108.0 |
Percentage of Target Sequences with motif | 13.08% |
Number of Background Sequences with motif | 1490.2 |
Percentage of Background Sequences with motif | 3.11% |
Average Position of motif in Targets | 49.0 +/- 26.6bp |
Average Position of motif in Background | 50.8 +/- 31.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.01 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 1 |
Score: | 0.86 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGTCABGCTG AGGTCA----- |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 2 |
Score: | 0.83 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGTCABGCTG AGRGGTCA----- |
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ESR2/MA0258.2/Jaspar
Match Rank: | 3 |
Score: | 0.83 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGTCABGCTG---- AGGTCACCCTGACCT |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 4 |
Score: | 0.80 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGTCABGCTG TRAGGTCA----- |
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RORA/MA0071.1/Jaspar
Match Rank: | 5 |
Score: | 0.79 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GGTCABGCTG ATCAAGGTCA----- |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 6 |
Score: | 0.79 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------GGTCABGCTG CGCGCCGGGTCACGTA- |
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ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer
Match Rank: | 7 |
Score: | 0.78 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGTCABGCTG--- NAGGTCACNNTGACC |
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PB0057.1_Rxra_1/Jaspar
Match Rank: | 8 |
Score: | 0.76 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------GGTCABGCTG NTNNNGGGGTCANGNNN |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 9 |
Score: | 0.75 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGTCABGCTG AAGGTCAC---- |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 10 |
Score: | 0.75 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GGTCABGCTG CAAAGGTCAAGGG- |
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