Information for 13-AGAAGAATSC (Motif 22)

C G T A C T A G C G T A C G T A A C T G C G T A C G T A A C G T A T C G A G T C
Reverse Opposite:
C T A G T A G C C G T A A C G T C G A T A G T C C G A T A C G T A G T C A C G T
p-value:1e-8
log p-value:-1.993e+01
Information Content per bp:1.873
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif95.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets42.7 +/- 28.8bp
Average Position of motif in Background49.7 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0067.1_Sox18_1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGAAGAATSC--
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G T A A C T G C G T A C G T A A C G T A T C G A G T C A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

TEAD4/MA0809.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGAAGAATSC-
-NTGGAATGTN
 C G T A C T A G C G T A C G T A A C T G C G T A C G T A A C G T A T C G A G T C A C G T
A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGAAGAATSC
NTTNAGAACAATTA
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G T A A C T G C G T A C G T A A C G T A T C G A G T C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGAAGAATSC
NGAAGC----
 C G T A C T A G C G T A C G T A A C T G C G T A C G T A A C G T A T C G A G T C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGAAGAATSC---
TTTAGAACAATAAAAT
 A C G T A C G T A C G T C G T A C T A G C G T A C G T A A C T G C G T A C G T A A C G T A T C G A G T C A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

TEAD1/MA0090.2/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGAAGAATSC-
-NTGGAATGTG
 C G T A C T A G C G T A C G T A A C T G C G T A C G T A A C G T A T C G A G T C A C G T
A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGAAGAATSC---
TTAAGAACAATAAATT
 A C G T A C G T A C G T C G T A C T A G C G T A C G T A A C T G C G T A C G T A A C G T A T C G A G T C A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGAAGAATSC----
TNNAGAACAATANATNN
 A C G T A C G T A C G T C G T A C T A G C G T A C G T A A C T G C G T A C G T A A C G T A T C G A G T C A C G T A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGAAGAATSC---
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G T A A C T G C G T A C G T A A C G T A T C G A G T C A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGAAGAATSC
-NAACAAT--
 C G T A C T A G C G T A C G T A A C T G C G T A C G T A A C G T A T C G A G T C
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T