Information for 8-AGGTCATGCC (Motif 15)

C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A A C G T A C T G C G T A A G T C A G T C A C G T
p-value:1e-9
log p-value:-2.142e+01
Information Content per bp:1.530
Number of Target Sequences with motif106.0
Percentage of Target Sequences with motif13.37%
Number of Background Sequences with motif3405.9
Percentage of Background Sequences with motif7.13%
Average Position of motif in Targets50.5 +/- 26.3bp
Average Position of motif in Background50.1 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AGGTCATGCC
TRAGGTCA----
 A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGGTCATGCC
AGGTCA----
 C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A G T C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AGGTCATGCC
ATCAAGGTCA----
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A G T C
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AGGTCATGCC
TCAAGGTCAT---
 A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A G T C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AGGTCATGCC
--GTCATN--
 C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A G T C
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AGGTCATGCC
AGRGGTCA----
 A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------AGGTCATGCC
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A G T C
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------AGGTCATGCC-
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A G T C A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCATGCC
TCAAGGTCAN---
 A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A G T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGGTCATGCC
TTCAAGGTCAT---
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A G T C
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T A C G T