Information for 4-GCCTCCCCWBCTGGSG (Motif 7)

T A C G T A G C A G T C G C A T T A G C T A G C A G T C A G T C G C A T A G C T G T A C C G A T A T C G A T C G A T C G C A T G
Reverse Opposite:
G T A C T A G C T A G C A T G C C G T A A C T G T C A G C G T A T A C G T C A G A C T G A T C G C G T A C T A G A T C G A T G C
p-value:1e-6
log p-value:-1.589e+01
Information Content per bp:1.601
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif749.6
Percentage of Background Sequences with motif1.54%
Average Position of motif in Targets35.9 +/- 22.7bp
Average Position of motif in Background51.2 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GCCTCCCCWBCTGGSG
---CCCCCTGCTGTG-
 T A C G T A G C A G T C G C A T T A G C T A G C A G T C A G T C G C A T A G C T G T A C C G A T A T C G A T C G A T C G C A T G
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCTCCCCWBCTGGSG
-GGCCYCCTGCTGDGH
 T A C G T A G C A G T C G C A T T A G C T A G C A G T C A G T C G C A T A G C T G T A C C G A T A T C G A T C G A T C G C A T G
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GCCTCCCCWBCTGGSG-
-----NVCAGCTGBBNN
 T A C G T A G C A G T C G C A T T A G C T A G C A G T C A G T C G C A T A G C T G T A C C G A T A T C G A T C G A T C G C A T G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCCTCCCCWBCTGGSG--
---TCNCCTGCTGNGNNN
 T A C G T A G C A G T C G C A T T A G C T A G C A G T C A G T C G C A T A G C T G T A C C G A T A T C G A T C G A T C G C A T G A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GCCTCCCCWBCTGGSG
-----GCCATCTGTT-
 T A C G T A G C A G T C G C A T T A G C T A G C A G T C A G T C G C A T A G C T G T A C C G A T A T C G A T C G A T C G C A T G
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCCTCCCCWBCTGGSG--
---TNTCCTGCTGTGNNG
 T A C G T A G C A G T C G C A T T A G C T A G C A G T C A G T C G C A T A G C T G T A C C G A T A T C G A T C G A T C G C A T G A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCCTCCCCWBCTGGSG
----NNVCAGCTGB--
 T A C G T A G C A G T C G C A T T A G C T A G C A G T C A G T C G C A T A G C T G T A C C G A T A T C G A T C G A T C G C A T G
A C G T A C G T A C G T A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCCTCCCCWBCTGGSG
----CCTCACCTG---
 T A C G T A G C A G T C G C A T T A G C T A G C A G T C A G T C G C A T A G C T G T A C C G A T A T C G A T C G A T C G C A T G
A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCCTCCCCWBCTGGSG
-----ACCATCTGTT-
 T A C G T A G C A G T C G C A T T A G C T A G C A G T C A G T C G C A T A G C T G T A C C G A T A T C G A T C G A T C G C A T G
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GCCTCCCCWBCTGGSG
-------CAGCTGNT-
 T A C G T A G C A G T C G C A T T A G C T A G C A G T C A G T C G C A T A G C T G T A C C G A T A T C G A T C G A T C G C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T