Information for 2-TATTTAAAGA (Motif 6)

C G A T G T C A A C G T A C G T C A G T C G T A C G T A C G T A A C T G C G T A
Reverse Opposite:
C G A T A G T C A C G T A C G T C G A T G T C A C G T A C G T A C A G T C G T A
p-value:1e-7
log p-value:-1.629e+01
Information Content per bp:1.862
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif7.41%
Number of Background Sequences with motif242.4
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets40.6 +/- 27.1bp
Average Position of motif in Background52.0 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TATTTAAAGA
NATTCAAAT-
 C G A T G T C A A C G T A C G T C A G T C G T A C G T A C G T A A C T G C G T A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TATTTAAAGA
TCTATTTTTAGA
 A C G T A C G T C G A T G T C A A C G T A C G T C A G T C G T A C G T A C G T A A C T G C G T A
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TATTTAAAGA
TCTATTTATAGN
 A C G T A C G T C G A T G T C A A C G T A C G T C A G T C G T A C G T A C G T A A C T G C G T A
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TATTTAAAGA
CTATTTTTGG-
 A C G T C G A T G T C A A C G T A C G T C A G T C G T A C G T A C G T A A C T G C G T A
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TATTTAAAGA
GCTATTTATAGC
 A C G T A C G T C G A T G T C A A C G T A C G T C A G T C G T A C G T A C G T A A C T G C G T A
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TATTTAAAGA
KCTATTTTTRGH
 A C G T A C G T C G A T G T C A A C G T A C G T C A G T C G T A C G T A C G T A A C T G C G T A
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

HOXC10/MA0905.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TATTTAAAGA-
-NTTTTACGAC
 C G A T G T C A A C G T A C G T C A G T C G T A C G T A C G T A A C T G C G T A A C G T
A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TATTTAAAGA
GCTATTTTTGGM
 A C G T A C G T C G A T G T C A A C G T A C G T C A G T C G T A C G T A C G T A A C T G C G T A
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TATTTAAAGA
CGGTTTCAAA--
 A C G T A C G T C G A T G T C A A C G T A C G T C A G T C G T A C G T A C G T A A C T G C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TATTTAAAGA
ATATTTACATA
 A C G T C G A T G T C A A C G T A C G T C A G T C G T A C G T A C G T A A C T G C G T A
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A