Information for 1-ATTCTGGGGTTTT (Motif 4)

G T C A G A C T A C G T A G T C C G A T A C T G C T A G A C T G C A T G G A C T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A G A T C A G T C A G T C G T A C C G T A A C T G G T C A C G T A A C G T
p-value:1e-8
log p-value:-1.861e+01
Information Content per bp:1.783
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif6.48%
Number of Background Sequences with motif113.4
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets46.0 +/- 24.9bp
Average Position of motif in Background49.2 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:forward strand
Alignment:ATTCTGGGGTTTT--
-----GGGGATTTCC
 G T C A G A C T A C G T A G T C C G A T A C T G C T A G A C T G C A T G G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:ATTCTGGGGTTTT--
-----GGGAATTTCC
 G T C A G A C T A C G T A G T C C G A T A C T G C T A G A C T G C A T G G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ATTCTGGGGTTTT---
----NGGGGATTTCCC
 G T C A G A C T A C G T A G T C C G A T A C T G C T A G A C T G C A T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:ATTCTGGGGTTTT--
-----GGGGATTTCC
 G T C A G A C T A C G T A G T C C G A T A C T G C T A G A C T G C A T G G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:ATTCTGGGGTTTT--
-----GGGAATTTCC
 G T C A G A C T A C G T A G T C C G A T A C T G C T A G A C T G C A T G G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATTCTGGGGTTTT
-TGCTGTGATTT-
 G T C A G A C T A C G T A G T C C G A T A C T G C T A G A C T G C A T G G A C T A C G T A C G T A C G T
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ATTCTGGGGTTTT
RGSMTBCTGGGAAAT-
 A C G T A C G T A C G T G T C A G A C T A C G T A G T C C G A T A C T G C T A G A C T G C A T G G A C T A C G T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATTCTGGGGTTTT
-GTCTGTGGTTT-
 G T C A G A C T A C G T A G T C C G A T A C T G C T A G A C T G C A T G G A C T A C G T A C G T A C G T
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATTCTGGGGTTTT
WDNCTGGGCA---
 G T C A G A C T A C G T A G T C C G A T A C T G C T A G A C T G C A T G G A C T A C G T A C G T A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATTCTGGGGTTTT----
-NNATTGGACTTTNGNN
 G T C A G A C T A C G T A G T C C G A T A C T G C T A G A C T G C A T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C